Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 24 Aligned Residues 344 % Identity 18% Template c2pozA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative dehydratase; PDBTitle: crystal structure of a putative dehydratase from mesorhizobium loti Resolution 2.04 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	V	K	I	I	G	R	E	I	I	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P	I	A	Q	A	L	I	G	K
Query Conservation
Alig confidence																					.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	G	V	N	I	Y	L	L	K	S	G	R	L	H	P	V	L	.	V	E	I	S	T	D	E	G	I	T	G	A	G	E	A	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	G	V	G	G	T	A	A	A	G	X	I	K	D	L	S	E	R	F	L	I	G	K
Template Known Secondary structure													B	T	T	B					.						T	T	S								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S																	T	T	T
Template Predicted Secondary structure																					.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	.	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N	G	G	E	H	A	D
Query Conservation																									.
Alig confidence																									.																																				.	.	.	.	.	.															.
Template Conservation																																																													.	.	.	.	.	.															.
Template Sequence		D	P	S	R	I	E	E	L	W	S	T	X	Y	D	H	S	F	W	A	K	N	G	G	A	I	I	F	A	G	I	S	A	I	E	Q	A	L	W	D	I	K	G	K	C	L	G	V	P	V	Y	E	L	F	G	G	K	I	R	D	.	.	.	.	.	.	R	V	R	A	Y	A	N	G	W	Y	G	A	A	D	.
Template Known Secondary structure			T	T													S	S	T	T	T	T																									T	S	B					T	T			S		S	.	.	.	.	.	.								S			T	T			.
Template Predicted Secondary structure																																																													.	.	.	.	.	.															.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.							.	.	.	.	.	.	.	130	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y	E	L	G	K	D	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	T	P	D	E	F	A	R	A	V	E	R	P	L	K	E	G	Y	G	A	L	K	F	Y	P	L	A	Q	R	V	G	S	A	L	Q	H	V	T	R	R	S	X	S	A	E	A	I	E	L	A	Y	R	R	V	K	A	V	R	D	A	A	.	.	.	.	G	P	E	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S								T						T	T		S												T	T						B	T	T	B																					.	.	.	.		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.
Template SS confidence
														137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L	V	G	D	D	L	F	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template Sequence		E	L	X	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	G	G	L	T	T	D	E	T	I	R	F	C	R	K	I	.	G	E	L	D	I	C	F	V	E	E	P	C	D	P	F	D	N	G	A	L	K	V	I	S	E	Q	I	P	L	P	I	A	V	.	.	.	G	E	R	V
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S													.	G	G	G									S		T	T													S	S					.	.	.		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template SS confidence
		201	.	.	.	.																		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q	I	K	T	G	S	M	S	R	S	D
Query Conservation
Alig confidence																																																																															.
Template Conservation																																																																															.
Template Sequence		Y	T	R	F	G	F	R	K	I	F	E	L	Q	A	C	G	I	I	Q	P	D	I	G	T	A	G	G	L	X	E	T	K	K	I	C	A	X	A	E	A	Y	N	X	R	V	A	P	H	V	C	G	S	S	L	I	E	T	A	T	L	Q	L	E	A	N	I	T	N	F	X	I	H	E	H	Y	P	A	.	F	K
Template Known Secondary structure												T	T	T			S						T	T	T	S	S														T	T	T									S	S															T	T	B							G	G	.	G	G
Template Predicted Secondary structure																																																																															.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.
		402	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	K	Y	N	Q	L	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	D	G	Y	V	E	V	L	E
Template Known Secondary structure		G	S	T	T					B	S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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