Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 80 Aligned Residues 310 % Identity 19% Template c2pgwC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a putative muconate cycloisomerase from2 sinorhizobium meliloti 1021 Resolution 1.95 Å

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		3	.	.	.	.	.	.	10	.	.									.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure												.	.	.	.	.	.	.	.							.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.							.	.	.	.
Query Sequence		K	I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	.	I	D	S	R	G	N	.	.	.	.	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A
Query Conservation												.	.	.	.	.	.	.	.							.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.							.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	S	N	V	R	V	R	P	L	V	L	P	L	K	Q	P	Y	H	W	S	Y	G	I	R	E	S	F	A	V	N	L	I	E	I	E	A	D	D	G	T	V	G	I	G	E	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	A	P	D	Q	T	G	T	A	A
Template Known Secondary structure																						S	S	S															T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																							.	.	.	.	.	.	.	.	60	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		V	N	G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	.	.	.	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.
Template Conservation
Template Sequence		I	L	Y	R	L	A	K	H	L	V	G	H	S	P	H	D	V	A	P	L	I	A	R	I	F	H	Q	E	Y	L	G	H	G	A	N	I	X	R	A	A	N	Q	I	F	S	G	I	D	X	A	X	W	D	L	Q	G	K	L	A	G	L	P	V	H	Q	L	L	G	G	A	H	R	K	A	V	G	Y	F	Y	F
Template Known Secondary structure									T	T	T	T	S		G	G	G													T	G	G	G	T																											T		B	G	G	G	G	T	T			S	S	S				B
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	M	M	N	I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	E	E	L	A	R	D	A	A	V	G	H	A	Q	G	E	R	V	F	Y	L	K	V	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	K	L	D	L	E	I	T	A	A	V	R
Template Known Secondary structure					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S														T	T										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.																							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																.	.	.	.	.	.	.	180	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	V	K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V
Query Conservation
Alig confidence					.	.	.	.	.	.	.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation					.	.	.	.	.	.	.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		G	E	I	.	.	.	.	.	.	.	G	.	D	A	R	L	R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	E	G	W	S	V	H	D	A	I	N	X	C	R	K	L	.	E	K	Y	D	I	E	F	I	E	Q	P	T	V	S	W	S	I	P	A	X	A	H	V	R	E	K
Template Known Secondary structure		T	T	S	.	.	.	.	.	.	.	T	.	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T															.	G	G	G			S						S		T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.		.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		186	.	.								.		190	.	.	.	.	.	.																		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	D	K	I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T
Query Conservation
Alig confidence									.	.	.																																																						.
Template Conservation									.	.	.																																																						.
Template Sequence		V	G	I	P	I	V	A	.	.	.	D	Q	A	A	F	T	L	Y	D	V	Y	E	I	C	R	Q	R	A	A	D	X	I	C	I	G	P	R	E	I	G	G	I	Q	P	X	X	K	A	A	A	V	A	E	A	A	G	L	K	I	C	I	H	S	.	S	F	T	T	G	I	T	T	C	A	E	H	H	I	G	L
Template Known Secondary structure			S	S					.	.	.	S	T	T			S										T	T			S										T	S														T	T								.		S
Template Predicted Secondary structure									.	.	.																																																						.
Template SS confidence
		240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	Q	I	K	T	G	S	M	S	R	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	P	N	L	D	D	G	N	Q	I	X	W	Q
Template Known Secondary structure				S	S	B		S	S	B				G	G
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions