Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 65 Aligned Residues 300 % Identity 21% Template c2p0iA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-rhamnonate dehydratase; PDBTitle: crystal structure of l-rhamnonate dehydratase from gibberella zeae Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.					.	.	.	.		.	.	.																					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure														.	.	.	.					.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.					.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	K	I	V	K	I	I	G	R	E	I	.	.	.	.	I	D	S	R	.	G	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D
Query Conservation														.	.	.	.					.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.					.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	P	K	I	K	A	I	R	S	F	I	I	G	H	W	L	I	D	S	D	I	S	T	P	A	S	K	W	E	Q	Y	K	K	S	R	T	S	W	G	I	N	V	L	G	S	F	L	V	E	I	E	A	T	D	G	T	V	G	F	A	T	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T	T	S					T	T	T	T	S	G	G	G	S	S						T	T	T	S	S										T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	G	P	P	A	C	W	L	V	H	Q	H	F	E	R	F	L	I	G	A	D	P	R	N	T	N	L	L	F	E	Q	X	Y	R	A	S	X	F	Y	G	R	K	G	L	P	I	A	V	I	S	V	I	D	L	A	L	W	D	L	L	G	K	V	R	N	E	P	V	Y	R	L	I	G
Template Known Secondary structure		.	.	.	.	.	.	.												T	G	G	G	G	T	T	T			T	T													T	T	T	T		S	S	S																						T	S	B	G	G	G	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Sequence		G	A	T	K	E	R	L	D	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	T	G	P	E	P	T	A	A	K	A	X	G	F	W	G	G	K	V	P	L	P	F	C	P	D	D	G	H	E	.	.	.	.	.	.	.	.	G
Template Known Secondary structure				S		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S									T		S										G	G	G				.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.																																.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.									.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E
Query Conservation
Alig confidence																	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		L	R	K	N	V	E	F	L	R	K	H	R	E	A	V	.	.	.	.	.	.	.	G	P	D	F	P	I	X	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	Y	X	S	L	N	V	S	Y	T	I	E	L	V	K	A	C	.	L	D	L	N	I	N	W	W	E	E	C	L	S	P
Template Known Secondary structure																	.	.	.	.	.	.	.		S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T														T	.	G	G	G			S						S		T
Template Predicted Secondary structure																	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.								.	.	.	.	.	.	.	220	.																		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		S	D	W	D	G	F	A	Y	Q	T	K	V	L	.	G	D	K	I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E
Query Conservation															.
Alig confidence															.							.	.	.																																																				.
Template Conservation																						.	.	.																																																				.
Template Sequence		D	D	T	D	G	F	A	L	I	K	R	A	H	P	T	V	K	F	T	T	.	.	.	G	E	H	E	Y	S	R	Y	G	F	R	K	L	V	E	G	R	N	L	D	I	I	Q	P	D	V	X	W	L	G	G	L	T	E	L	L	K	V	A	A	L	A	A	A	Y	D	V	P	V	V	P	.	H	A	S	G	P
Template Known Secondary structure		T		T	T										T	T	S					.	.	.		T	T												T	T				S						T	T	T	S	S															T	T			B			.				T
Template Predicted Secondary structure																						.	.	.																																																				.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	Y	H	F	Q	I	S	Q	P	N	T	P	F	Q	E	Y	L
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions