Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 117 Aligned Residues 271 % Identity 15% Template c2oztA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tlr1174 protein; PDBTitle: crystal structure of o-succinylbenzoate synthase from2 thermosynechococcus elongatus bp-1 Resolution 1.42 Å

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		10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		R	E	I	I	D	S	R	G	N	.	.	.	.	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P	I	A	Q	A	L	I	G	K	D	A	K
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		E	P	L	T	T	A	Q	G	V	W	R	S	R	S	G	I	Y	L	R	L	E	D	E	Q	G	Q	V	G	Y	G	E	I	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	G	W	G	S	E	T	L	N	A	D	I	A	L	C	Q	Q	L	.	.	.	.	P	G	H	L	T	P	E
Template Known Secondary structure							T	T																T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S	S													S	.	.	.	.		S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N	G	G	E	H	A	D	N	N	V	D
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	X	A	T	I	P	E	A	L	P	A	A	.	.	.	.	.	.	.	.	.	.	Q	F	G	F	A	T	A	W	Q	S	V	G	R	L	P	Y	R	V	R	P	W	P	I	C	A	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S		T	T					.	.	.	.	.	.	.	.	.	.											T	T	T		S								B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.											.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	S	G	Q	A	A	L	E	Q	W	Q	Q	S	W	Q	R	G	Q	T	T	F	K	W	K	V	G	V	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	E	E	E	Q	A	I	L	K	A	L	L	A	A	L	.	.	.	.	.	.	.	P	P	G	A	K	L	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	G	G	G											T	T									S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
										114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140															.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.								.	.	.	160	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	.	.	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L	V	G	D	D	L	F	V	T	N
Query Conservation																																							.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																																	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.
Template Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	G	S	W	D	R	A	T	A	N	R	W	F	A	W	L	D	R	H	G	N	G	K	I	E	Y	V	E	Q	P	L	P	P	D	Q	W	Q	A	L	L	S	L	A	Q	T	V	T	T	A	I	A	L	.	.	.	D	E	S	V	V	S
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																				T	T								S		T	T													S	S					.	.	.	S	T	T			S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.
Template SS confidence
		165																		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	.	.	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q
Query Conservation																																																						.	.
Alig confidence																													.																						.			.	.
Template Conservation																													.																						.
Template Sequence		A	A	E	V	Q	R	W	V	D	R	G	W	P	G	F	F	V	I	K	T	A	L	F	G	D	P	D	.	S	L	S	L	L	L	R	R	G	L	E	P	Q	R	L	V	F	S	S	A	L	.	E	G	A	I	A	R	T	A	I	F	H	L	L	E	T	W	Q	P	C	H
Template Known Secondary structure											T	T			S										S				.								T	T			G	G	G				B			S	.																				S
Template Predicted Secondary structure																													.																						.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions