Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 28 Aligned Residues 332 % Identity 17% Template c2ox4E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of putative dehydratase from zymomonas mobilis zm4 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		K	I	V	K	I	I	G	R	E	I	I	.	.	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P	I	A	Q	A	L	I
Query Conservation													.	.
Alig confidence													.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	K	I	E	I	F	H	V	H	T	R	P	Q	S	G	Q	R	P	I	L	V	K	V	S	T	D	E	G	I	Y	G	L	G	E	A	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	G	V	G	G	S	A	A	A	G	I	L	K	D	Y	A	A	L	L	I
Template Known Secondary structure															T	T	T												T	T	S								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S																	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	.	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N	G	G	E	H
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		G	E	D	P	F	N	T	E	A	I	W	E	K	L	F	K	K	T	F	W	G	Q	G	G	G	T	V	I	F	S	G	I	S	A	F	D	I	A	F	W	D	I	K	G	K	A	L	N	L	P	V	Y	K	L	L	G	G	K	N	R	E	D	L	R	V	Y	A	S	Q	L	Q	F	G	W	G	K	E	R	K	S
Template Known Secondary structure		T			T	T												S	S	S	G	G	G	G																									T	S	B	G	G	G	G	T	T			S	S	S	S								G	G	G		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y	E	L	G	K
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Template Sequence		K	G	.	.	.	.	.	.	.	.	.	.	.	.	R	K	E	E	Y	A	E	E	A	L	K	A	V	A	E	G	Y	D	A	V	K	V	D	V	L	A	H	D	R	N	G	S	R	E	G	V	F	L	E	G	P	L	P	.	.	.	S	E	T	I	K	I	G	V	E	R	V	E	A	I	R	N	A	V	G	P
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	S														T	T		S						S	S	S	S		T	T	S			T	T				S	S	S			.	.	.																				T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Template SS confidence
		142	.													.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q	L	V	G	D	D	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template Sequence		D	V	D	I	I	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	G	H	T	D	L	V	S	A	I	Q	F	A	K	A	I	.	E	E	F	N	I	F	F	Y	E	E	I	N	T	P	L	N	P	R	L	L	K	E	A	K	K	K	I	D	I	P	L	A	S	.	.	.	G	E
Template Known Secondary structure		T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S													.	G	G	G			S						S		T	T	S	T								T	T			S					.	.	.		T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																		.	.	.
Template SS confidence
		207	.	.	210	.	.	.																		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q	I
Query Conservation
Alig confidence																																																		.			.
Template Conservation																																																		.			.
Template Sequence		R	I	Y	S	R	W	G	F	L	P	F	L	E	D	R	S	I	D	V	I	Q	P	D	L	G	T	C	G	G	F	T	E	F	K	K	I	A	D	M	A	H	I	F	E	V	T	V	Q	.	A	H	.	V	A	G	T	G	V	A	E	A	A	S	L	H	A	E	I	A	I	P	N	F
Template Known Secondary structure		T													T	T			S						T	T	T	T	T															T	T					.			.			S														T		S	S	B
Template Predicted Secondary structure																																																		.			.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions