Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 77 Aligned Residues 285 % Identity 18% Template c2ovlA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative racemase; PDBTitle: crystal structure of a racemase from streptomyces2 coelicolor a3(2) Resolution 2.13 Å

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		4	.	.	.	.	.	10	.	.									.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure											.	.	.	.	.	.	.	.						.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.						.	.	.	.	.
Query Sequence		I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	.	I	D	S	R	G	.	.	.	.	.	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A
Query Conservation											.	.	.	.	.	.	.	.						.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.						.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	R	V	R	T	D	L	Y	R	I	P	L	P	T	R	L	T	D	S	T	H	G	A	X	X	D	F	E	L	I	T	V	R	I	E	D	S	D	G	A	T	G	L	G	Y	T	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	H	G	G	A	A	V	A	T	X
Template Known Secondary structure																			B		T	T	T																T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																					.	.	.	.	.	.	.	60	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	K	D	L	R	G	C	L	L	G	A	D	A	E	Q	I	E	K	I	W	Q	S	X	W	W	R	L	H	Y	A	G	R	G	G	H	A	T	S	A	I	S	A	V	D	I	A	L	W	D	L	K	G	I	R	A	R	T	P	L	W	K	L	F	G	G	Y	D	P	V	V	P	V	Y	A	G	G	I	D	L
Template Known Secondary structure					T	T					T	T	S		T	T													T		T	T		S	S	T																					T	T	S	B					T	T				S										B	T
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	A	D	L	K	T	Q	A	D	R	F	L	A	G	G	F	R	A	I	K	X	K	V	G	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	K	E	D	V	D	R	V	S	A	L	R	E	H	L
Template Known Secondary structure		T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T		S									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.																						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.															.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	G	D	S	F	P	L	X	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	X	K	W	T	V	D	G	A	I	R	A	A	R	A	L	.	A	P	F	D	L	H	W	I	E	E	P	T	I	P	D	D	L	V	G	N	A	R	I	V	R	E	S	G	H
Template Known Secondary structure		.	.	.	.	.	.	.		T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S													.	G	G	G			S						S		T	T														S
Template Predicted Secondary structure		.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
									189	190	.	.	.	.	.	.	.																		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		T	I	A	G	.	.	.	G	E	N	L	H	T	L	Y	D	F	H	N	A	V	R	A	G	S	L	T	L	P	E	P	D	V	S	N	I	G	G	Y	T	T	F	R	K	V	A	A	L	A	E	A	N	N	X	L	L	T	S	H	G	V
Template Known Secondary structure						.	.	.		T	T			S											T			S						T	T	T	T	T	S														T	T							S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		244	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions