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Job DescriptionP0A6P9
Confidence100.00%DateWed Jan 25 15:20:15 GMT 2012
Rank114Aligned Residues278
% Identity15%Templatec2oktA_
PDB info PDB header:lyaseChain: A: PDB Molecule:o-succinylbenzoic acid synthetase; PDBTitle: crystal structure of o-succinylbenzoic acid synthetase from2 staphylococcus aureus, ligand-free form
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.. .......20 .........30.........40.........50.........60.........70
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Query Sequence  KIVKIIGREI. . . . . . . . IDSRGNPT. . . . VEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAA
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Template Sequence  KLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGECNAFQTDW. . . . . . . . . . . . . . YDHETIASVKHV
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SS
TT




BSSTT..............S
S
B
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   2.......10.........20.........30.........40.........50..... ....60.......
 
   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  VNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPM
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Template Sequence  IEQ. WFEDNRNKSFETYEAALKLVDSLENTP. . . . . . . AARATIVMALYQMFHV. . . LPSFSVAYGATAS. . . . . . . . . .
Template Known Secondary structure  .TT

B
STTGGGTT
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   68.70 .........80.........90....... ..100.........110... ......120......
 
   151........160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  MNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . GLSNKQLESLKATKPTRIKLKWTP. . . . . . . . . . . . . . . . . . QIMHQIRVLREL.
Template Known Secondary structure  .........................S



S

T..................TTTS.
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   127..130.........140.........150 .........160..
 
   231........240.........250.........260.........270.........280.........290.........300.........310
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Query Sequence  KAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGD
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Template Sequence  . . . . . . . DFHFQLVID. . . . . . . . . . . . . . . . . ANESLDRQDFTQL. QLL. AREQVLYIEEPFKDIS. . MLDEVADGTIP
Template Known Secondary structure  .......SS

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TT


GGG..GGG



SSGG..GGGGS
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   163......170. ........180.... ... ..190.........200... ......210....
 
   311........320.........330.........340.........350.........360.........370.........380.........390
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Query Sequence  KIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAG
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Template Sequence  PIAL. . . DEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGMY. EYGLSRYFTAMLARKGD
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TSGGGTT
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   215... .220.........230.........240.........250.........260.........270... ......280.........290
 
   391
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Query Sequence  Q
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  Y
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   291
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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