 |
Job Description | P0A6P9 | Confidence | 29.79% | Date | Wed Jan 25 15:20:15 GMT 2012 |
Rank | 387 | Aligned Residues | 128 |
% Identity | 12% | Template | c2o8vA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:phosphoadenosine phosphosulfate reductase; |
PDBTitle: paps reductase in a covalent complex with thioredoxin c35a
|
Resolution | 3.00 Å |
|
 |
  |   |
226 | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | |
. | . | . | . | . | 300 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | E | A | V | K | A | A | G | Y | E | L | G | K | D | I | T | L | A | M | D | C | A | A | S | E | F | Y | K | D | G | K | Y | V | L | A | G | E | G | N | K | A | F | T | S | E | E | F | T | H | F | L | E | E | L | T | K | Q | Y | P | I | V | S | I | E | D | G | L | D | . |
E | S | D | W | D | G | F | A | Y | Q |
Query Conservation |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|
|
|   | . |   |   |
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|
|
|   |
|   |
|   |   |   |
Template Sequence |   |
A | E | G | R | V | A | W | A | L | D | N | L | P | G | E | Y | V | L | S | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | F | G | I | Q | A | A | V | S | L | H | L | V | N | Q | I | R | P | D | I | P | V | I | L | T | D | T | G | Y | L | F | P | E | T | Y | R | F | I | D | E | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | S |
| S |
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| S | T | T |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  |
|
|
| S |
| B |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | |
. | 370 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
T | K | V | L | G | D | K | I | Q | L | V | G | D | D | L | F | V | T | N | T | K | I | L | K | E | G | I | E | K | G | I | A | N | S | I | L | I | K | F | N | Q | I | G | S | L | T | E | T | L | A | A | I | K | M | A | K | D | A | G | Y | T | A | V | I | . |
S | H | R | S | G | E | T | E |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
| . |
|   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
Template Sequence |   |
T | D | K | L | K | L | N | L | K | V | . |
. |
. |
. |
Y | R | A | T | E | S | A | A | W | Q | E | A | R | Y | G | K | L | W | E | Q | G | V | E | G | I | E | K | Y | N | D | I | N | K | V | E | P | M | N | R | A | L | K | E | L | N | A | Q | T | W | F | A | G | L | R | R | E | Q | S | G |
Template Known Secondary structure |   |
 |  |  | T | T |
|  |  |  |  | . | . | . | . |
|
|
| S | S |
|  |  |  |  |  |  |  | T |
|
| G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
| S | T | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | |
|
|
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|