Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 86 Aligned Residues 314 % Identity 17% Template c2hzgB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme/enolase PDBTitle: crystal stucture of predicted mandelate racemase from rhodobacter2 sphaeroides Resolution 2.02 Å

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		3	.	.	.	.	.	.	10	.	.								.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		K	I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	I	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P	I
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	D	A	V	D	L	F	Y	L	S	M	P	E	V	T	D	A	A	D	G	S	Q	D	A	L	L	V	R	V	A	A	G	.	G	H	I	G	W	G	E	C	E	A	A	P	L	P	S	I	A	A	F	V	C	P	K	S	H	G	V	C	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V
Template Known Secondary structure		B												S	S			S	S	S		G	G	G										T	.	T								S	S														S	B	T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G
Template Predicted Secondary structure																																			.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.																.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		S	D	S	V	L	G	Q	R	L	D	G	P	D	D	I	A	R	I	A	A	L	V	G	Y	N	S	M	D	L	L	Q	A	P	H	M	L	S	G	I	E	M	A	L	W	D	L	L	G	R	R	L	S	A	P	A	W	A	L	L	G	Y	S	A	S	H	G	K	R	P	Y	A	S	L	L	F	G	D	.	.	.
Template Known Secondary structure		G	G	G	T	T	T		B		S	S															T	T	T		T	T																				T	T		B					T	T		S					B										S	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A	G	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	Q	E	T	L	E	R	A	R	A	A	R	R	D	G	F	A	A	V	K	F	G	W	G	P	I	G	R	G	.	.	.	.	.	.	.	.	.	.	.	T	V	A	A	D	A	D	Q	I	M	A	A	R	E	G	L	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S														T	T		S						S	T	T	T	T	S	S	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
																				145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.												.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.
Predicted Secondary structure																																					.	.																																						.
Query SS confidence																																					.	.																																						.
Query Sequence		E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	.	.	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	.	L	G	D	K	I
Query Conservation																																					.	.																																						.
Alig confidence		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.											.																											.
Template Conservation		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		.	.	G	P	D	G	D	L	M	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	Q	I	F	G	E	D	V	E	A	A	A	A	R	L	P	T	L	.	D	A	A	G	V	L	W	L	E	E	P	F	D	A	G	A	L	A	A	H	A	A	L	A	G	R	G	A	R	V	R	I
Template Known Secondary structure		.	.		S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	T	T							T	T					.			T	T								S		T	T										T	T			S	S
Template Predicted Secondary structure		.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
				191	.	.	.	.	.	.	.	.																		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q	I
Query Conservation
Alig confidence				.	.	.
Template Conservation				.	.	.
Template Sequence		A	G	.	.	.	G	E	A	A	H	N	F	H	M	A	Q	H	L	M	D	Y	G	R	I	G	F	I	Q	I	D	C	G	R	I	G	G	L	G	P	A	K	R	V	A	D	A	A	Q	A	R	G	I	T	Y	V	N	H	T	F	T	S	H	L	A	L	S	A	S	L	Q	P	F	A	G	L	E	A	D	R	I
Template Known Secondary structure				.	.	.		T	T			S										T	S			S										T	S															T									S										G	G	G	T	T		T	T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		251	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions