|   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | E | A | I | R | M | G | S | E | V | F | H | H | L | A | K | V | L | K | A | K | G | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | T | A | V | G | D | E | G | G | Y | A | P | N | L | G | S | N | A | E | A | L | A | V | I | A | E | A | V | K | A | A | G | Y | E | L | G |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|
| . | . | . | . | . | . |
|   |
|
|
|   |
|   |   |   |
|
|
|   |
|
|
|   |   |   |
|
Template Sequence |   |
L | D | D | I | A | R | V | K | Q | D | F | V | D | A | A | R | R | A | R | D | A | G | F | E | W | I | E | L | H | F | A | H | G | Y | L | G | Q | S | F | F | S | E | H | S | N | K | R | T | D | A | Y | G | G | . |
. |
. |
. |
. |
. |
S | F | D | N | R | S | R | F | L | L | E | T | L | A | A | V | R | E | V | W | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |
| T | T | T |
|
|
|
| S | T | T | S | S | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
  |
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 300 | . | |
. | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
K | D | I | T | L | A | M | D | C | A | A | S | E | F | Y | K | D | G | K | Y | V | L | A | G | E | G | N | K | A | F | T | S | E | E | F | T | H | F | L | E | E | L | T | K | Q | Y | P | I | V | S | I | E | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | D | E | S | D | W | D | G | F | . |
A | Y | Q | T | K |
Query Conservation |   |
  |
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |
|   |   |
|   | . |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |
| . |   |   |   |
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
Template Sequence |   |
E | N | L | P | L | T | A | R | F | G | V | L | E | Y | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | R | D | E | Q | T | L | E | E | S | I | E | L | A | R | R | F | . |
K | A | G | G | L | D | L | L | S | V | S | V | G | F | T | I | P | D | T | N | I | P | W | G | P | A | F | M | G | P | I | A | E | R | V | R | R |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |  |
|
|
| S | S | . | . | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | T | T |
|
|  |  |  |  |  |
|
|
|
| S | S |
|
|
|
|
|
|
| T | T | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . |
  |
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | G | D | K | I | Q | L | V | G | D | D | L | F | V | T | N | T | K | I | L | K | E | G | I | E | K | G | I | A | N | S | I | L | I |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|   |   |
|
| . | . | . |
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |
|
|   |
|   |
|
Template Sequence |   |
E | A | K | L | P | V | T | S | A | W | G | . |
. |
. |
F | G | T | P | Q | L | A | E | A | A | L | Q | A | N | Q | L | D | L | V | S | V |
Template Known Secondary structure |   |
 |  | T |
|
|  |  |  |
| S | S | . | . | . | T | T | S |  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
293 | . | . | . | . | . | . | 300 | . | . | . | |
|
|
. | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . |
  |