Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 25 Aligned Residues 337 % Identity 15% Template c2gl5A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative dehydratase protein; PDBTitle: crystal structure of putative dehydratase from salmonella thyphimurium Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.							20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		K	I	V	K	I	I	G	R	E	I	I	D	S	R	G	N	P	.	.	.	.	.	.	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A	V	N	G	P	I	A
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	S	I	E	V	F	D	C	E	L	K	K	R	D	Q	T	M	S	S	Y	N	P	V	L	I	R	V	N	T	D	S	G	L	S	G	I	G	E	V	G	L	A	Y	G	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	A	G	V	G	I	I	R	D	L	A
Template Known Secondary structure													G	G	G	T		G	G	G	T	T											T	T	S								S		S	S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																					50	.	.	.	.	.	.	.	.	.	60	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	.	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M	M	N	I	I	N
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		P	L	I	V	G	E	D	P	L	N	I	E	K	I	W	E	F	F	F	R	K	T	F	W	G	M	G	G	G	N	V	F	Y	A	G	M	S	A	I	D	I	A	L	W	D	I	K	G	K	Y	L	G	V	P	V	Y	Q	L	L	G	G	K	T	N	E	K	L	R	T	Y	A	S	Q	L	Q	F	G	W	G	D
Template Known Secondary structure		G	G	T	T	T	S		T	T												S	S	S	G	G	G	S																									T	S	B					T	T	S		S		S	S								G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	.	.	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V	K	A	A
Query Conservation																																																.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	H	I	L	V	.	.	.	.	.	.	.	.	.	.	.	.	T	P	E	E	Y	A	E	A	A	R	A	A	L	D	D	G	Y	D	A	I	K	V	D	P	L	E	I	D	R	N	G	D	D	C	V	F	Q	N	R	N	R	N	Y	S	G	L	L	L	A	D	Q	L	K	M	G	E	A	R	I	A	A	M
Template Known Secondary structure				S				.	.	.	.	.	.	.	.	.	.	.	.	S														T	T		S						S	S	S	B		T	T	S		B	T	T	T	S	S			G	G	G	G	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.													.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D	K	I	Q
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		R	E	A	M	G	D	D	A	D	I	I	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	S	L	L	G	T	N	S	A	I	Q	F	A	K	A	I	.	E	K	Y	R	I	F	L	Y	E	E	P	I	H	P	L	N	S	D	N	M	Q	K	V	S	R	S	T	T	I	P	I	A
Template Known Secondary structure							S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S													.	G	G	G								S	S		S	S													S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.																		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G	Q	I	K
Query Conservation
Alig confidence			.	.	.																																																					.	.
Template Conservation			.	.	.																																																					.	.
Template Sequence		T	.	.	.	G	E	R	S	Y	T	R	W	G	Y	R	E	L	L	E	K	Q	S	I	A	V	A	Q	P	D	L	C	L	C	G	G	I	T	E	G	K	K	I	C	D	Y	A	N	I	Y	D	T	T	V	Q	V	H	.	.	V	C	G	G	P	V	S	T	V	A	A	L	H	M	E	T	A	I	P	N	F	I
Template Known Secondary structure			.	.	.		T	T			T	T									T	T			S						T	T	T	T	T														T	T	T							.	.			S	S															T	T	B
Template Predicted Secondary structure			.	.	.																																																					.	.
Template SS confidence
		272				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		394
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		347

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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