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Job DescriptionP0A6P9
Confidence100.00%DateWed Jan 25 15:20:15 GMT 2012
Rank73Aligned Residues297
% Identity18%Templatec2gdqB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:yitf; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from bacillus subtilis at 1.8 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MSKIVKIIGREI. . . . . . . . IDSRGN. . . . PTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAV
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Template Sequence  LVKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGIDGWGECVD. . . . . . . . . . . . . . . . . . . . . . . WLPALH
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Query Sequence  AAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPV
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Template Sequence  VGFTKRIIPFLLGKQAGSRLSLVRTIQ. . . . . . . . . KWHQRAASAVSMALTEIAAKAADCSVCELWGGRYRE. . . . . . EI
Template Known Secondary structure  TTTSBTT
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Query Sequence  PMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAE
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Template Sequence  PVYASFQSYSDSPQ. . . . . . . . . . . WISRSVSNVEAQLKKGFEQIKVKIGGT. . . . . . . . . . . . . . SFKEDVRHINALQH
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Query Sequence  AVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQY. PIVSIEDGLDESDWDGFAYQTKV
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Template Sequence  TA. . . . . . . GSSITMILD. . . . . . . . . . . . . . . . . ANQSYDAAAAFKWERYF. SEWTNIGWLEEPLPFDQPQDYAMLRSR
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Query Sequence  LGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGT
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Template Sequence  LSVPVAG. . . GENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASAHAYDGSLSRLYALFAQACL
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   235....240. ........250.........260.........270.........280.........290.........300.........310.
 
   388
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Query Sequence  A
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Template Sequence  P
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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