 |
Job Description | P0A6P9 | Confidence | 21.90% | Date | Wed Jan 25 15:20:15 GMT 2012 |
Rank | 437 | Aligned Residues | 87 |
% Identity | 18% | Template | c1x1oC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; |
PDBTitle: crystal structure of project id tt0268 from thermus thermophilus hb8
|
Resolution | 1.90 Å |
|
 |
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | G | F | A | Y | Q | T | K | V | L | G | D | K | I | Q | L | V | G | D | D | L | F | V | T | N | T | K | I | L | K | E | G | I | E | K | G | I | A | N | S | I | L | I | K | F | N | Q | I | G | S | L | T | E | T | L | A | A | I | K | M | A | K | D | A | G | Y | T | A | V | I | S | H | R | S | G | E | T | E | D | A |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
| . | . | . |   |
|
|
|   |
|   |   |
|
|   |
|
|   |   |   |
| . |
|
|   |
|   |
|
| . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . |   |   |
|   |
|   |
|
| . | . | . |
|
|
|   |   |   |
Template Sequence |   |
E | A | V | R | R | A | K | A | R | A | P | H | Y | L | K | V | . |
. |
. |
E | V | E | V | R | S | L | E | E | L | E | E | A | L | E | A | G | . |
A | D | L | I | L | L | D | . |
. |
. |
N | F | P | L | E | A | L | R | E | A | V | R | R | V | G | . |
G | R | V | P | L | E | A | S | . |
. |
. |
G | N | M | T | L | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| T | T | S |
|  | . | . | . |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T | T | T | . |
| S |  |  |  |  |  | . | . | . | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T | . | T | S | S |
|  |  |  |  | . | . | . | S | S |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  | . | . | . |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
|
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
. | . | . | 220 | . | . | . | |
|
|
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
. | 240 | . | . | . | . | . | . | |
|
|
. | . | . | 250 | . | . |
  |
  |   |
379 | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | A | D | L | A | V | G | T | A | A | G | Q | I | K | T | G | S | M |
Query Conservation |   |
  |
|
|
|
|
|
|
|   |   |   |   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   | . |   |   |
|
|
|   |
|   |
|
|
|
|
Template Sequence |   |
R | A | K | A | A | A | . |
E | A | G | V | D | Y | V | S | V | G | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  | . |  |  | T |
| S |  |  |  |
| T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
253 | . | . | . | . | . | |
. | 260 | . | . | . | . | . | . | . | . | . | 270 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|