Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 89 Aligned Residues 305 % Identity 19% Template c1wufB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein lin2664; PDBTitle: crystal structure of protein gi:16801725, member of enolase2 superfamily from listeria innocua clip11262 Resolution 2.90 Å

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		3	.	.	.	.	.	.	10	.	.									.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure												.	.	.	.	.	.	.	.									.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.									.	.	.	.
Query Sequence		K	I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	.	I	D	S	R	G	N	P	T	.	.	.	.	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A
Query Conservation												.	.	.	.	.	.	.	.									.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.									.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	F	Q	K	A	R	L	I	H	A	E	L	P	L	L	A	P	F	K	T	S	Y	G	E	L	K	S	K	D	F	Y	I	I	E	L	I	N	E	E	G	I	H	G	Y	G	E	L	E	A	F	P	L	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	E	E	T	L	S	S	A	I	L	I
Template Known Secondary structure																						T	T																S	S	S											S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2002	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.															.	.	.	.	2060	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Sequence		I	K	E	Q	L	L	P	L	L	A	Q	R	K	I	R	K	P	E	E	I	Q	E	L	F	S	W	I	Q	G	N	E	.	.	.	.	.	.	.	M	A	K	A	A	V	E	L	A	V	W	D	A	F	A	K	M	E	K	R	S	L	A	K	M	I	G	A	T	K	E	S	.	.	.	.	.	.	.	I	K	V
Template Known Secondary structure					T	T										S	S	T	T						T	T	T	S		S			.	.	.	.	.	.	.																		T	T	S	B					T	T				S		.	.	.	.	.	.	.			B
Template Predicted Secondary structure																																	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template SS confidence
		2068	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.								.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130								.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	S	I	G	L	Q	Q	N	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	Q	L	V	N	Q	Y	V	D	Q	G	Y	E	R	V	K	L	K	I	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	D	I	Q	F	V	E	A	V	R	K	S	F
Template Known Secondary structure									S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T									B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B	S									T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2134	.	.	.	.	.	2140	.	.	.	.																.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.	.	.																		.	.	2170	.	.	.	.	.	.	.	.	.	2180	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.						.
Template Conservation		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.						.
Template Sequence		.	.	.	.	.	.	.	.	P	K	L	S	L	M	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	S	A	Y	N	R	E	D	F	L	.	L	L	K	E	L	.	D	Q	Y	D	L	E	M	I	E	Q	P	F	G	T	K	D	F	V	D	H	A	W	L	Q	K	Q	L	K	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T				G	G	G			.						.		T	T	T		S						S		S	S		S								T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.						.
Template SS confidence
										2182	.	.	.	.	.	.	.																		2190	.	.	.	.	.	.	.	.	.	2200		.	.	.	.	.		.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G
Query Conservation
Alig confidence						.	.	.																																																								.
Template Conservation						.	.	.																																																								.
Template Sequence		R	I	C	L	.	.	.	D	E	N	I	R	S	V	K	D	V	E	Q	A	H	S	I	G	S	C	R	A	I	N	L	K	L	A	R	V	G	G	M	S	S	A	L	K	I	A	E	Y	C	A	L	N	E	I	L	V	W	C	G	G	M	L	.	E	A	G	V	G	R	A	H	N	I	A	L	A	A	R	N	E
Template Known Secondary structure						.	.	.		T	T			S											T			S						T	G	G	G	T	S														T	T										.														T	S	S	S
Template Predicted Secondary structure						.	.	.																																																								.
Template SS confidence
		2235	.	.	.				.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.		.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310
		391	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	K	T	G	S	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	F	P	G	D	I	S
Template Known Secondary structure				S		B	S
Template Predicted Secondary structure
Template SS confidence
		2311	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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