Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 93 Aligned Residues 298 % Identity 16% Template c1wueA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of protein gi:29375081, unknown member of enolase2 superfamily from enterococcus faecalis v583 Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.													.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	.	.	.	.	.	I	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V	A	A
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	Q	S	I	E	T	Y	Q	V	R	L	P	L	K	T	P	F	V	T	S	Y	G	R	L	E	E	K	A	F	D	L	F	V	I	T	D	E	Q	G	N	Q	G	F	G	E	L	V	A	F	E	Q	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	Q	E	T	L	V	T	E	R	F	I
Template Known Secondary structure																						T	T																T	T	S											S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1002	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.															.	.	.	.	1060	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V	P	M
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Sequence		I	Q	Q	H	L	I	P	L	L	L	T	E	A	I	E	Q	P	Q	E	V	S	T	I	F	E	E	V	K	G	H	W	.	.	.	.	.	.	.	M	G	K	A	A	L	E	T	A	I	W	D	L	Y	A	K	R	Q	Q	K	S	L	T	E	F	F	G	P	T	R	R	.	.	.	.	.	.	.	K	I	P	V
Template Known Secondary structure					T						T	T	S				S	T							G	G	G	S		S			.	.	.	.	.	.	.																		T	T	S	B	G	G	G	G	S	S	S			S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template SS confidence
		1068	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.								.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.								1130	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E	A	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	S	L	G	I	Q	E	D	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	L	K	Q	V	Q	L	A	V	E	K	G	Y	Q	R	V	K	L	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	G	Y	D	V	E	P	V	A	L	I	R	Q	H	F
Template Known Secondary structure									S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	B	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1134	.	.	.	.	.	1140	.	.	.	.																.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.																		.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V	L	G	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.			.
Template Conservation		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.			.
Template Sequence		.	.	.	.	.	.	.	.	P	N	L	P	L	M	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	S	A	Y	T	L	A	D	L	P	Q	L	.	Q	R	.	L	D	H	Y	Q	L	A	M	I	E	Q	P	F	A	A	D	D	F	L	D	H	A	Q	L	Q	R	E	L	K	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T				G	G	G					.		G	.	G	G	G	S			S						S		T	T		S								T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.			.
Template SS confidence
										1182	.	.	.	.	.	.	.																		1190	.	.	.	.	.	.	.	.	.	1200	.	.		.	.		.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T	A	A	G
Query Conservation
Alig confidence						.	.	.																																																								.
Template Conservation						.	.	.																																																								.
Template Sequence		R	I	C	L	.	.	.	D	E	N	I	R	S	L	K	D	C	Q	V	A	L	A	L	G	S	C	R	S	I	N	L	K	I	P	R	V	G	G	I	H	E	A	L	K	I	A	A	F	C	Q	E	N	D	L	L	V	W	L	G	G	M	F	.	E	S	G	V	G	R	A	L	N	L	Q	F	A	S	Q	P	T
Template Known Secondary structure						.	.	.		T	T			S											T			S										T	S														T	T										.														T	S	T	T
Template Predicted Secondary structure						.	.	.																																																								.
Template SS confidence
		1235	.	.	.				.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.		.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310
		391
Predicted Secondary structure
Query SS confidence
Query Sequence		Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1311

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions