Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 55 Aligned Residues 327 % Identity 17% Template c1rvkA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:isomerase/lactonizing enzyme; PDBTitle: crystal structure of enolase agr_l_2751 from agrobacterium tumefaciens Resolution 1.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.																	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	K	I	I	G	R	E	I	I	D	S	R	G	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	D	V	E	V	R	V	F	R	T	T	T	R	R	H	S	D	S	A	G	H	A	H	P	G	P	A	H	Q	V	E	Q	A	X	L	T	V	R	T	E	D	G	Q	E	G	H	S	F	T	A	P	E	I	V	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																				T	T	S																				T	T	S									G	G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	V	N	G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P
Query Conservation
Alig confidence		.																																	.																																								.	.	.	.	.	.	.
Template Conservation		.																																	.																																								.	.	.	.	.	.	.
Template Sequence		.	H	V	I	E	K	F	V	K	K	V	L	I	G	E	D	H	R	D	R	E	R	L	W	Q	D	L	A	H	W	Q	R	G	.	S	A	A	Q	L	T	D	R	T	L	A	V	V	D	C	A	L	W	D	L	A	G	R	S	L	G	Q	P	V	Y	K	L	I	G	G	Y	R	D	K	.	.	.	.	.	.	.
Template Known Secondary structure		.						T						T	T	S	B	T	T														T	T	.	T	T	T		S																					T		B								S		S		.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																	.																																								.	.	.	.	.	.	.
Template SS confidence
			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	M	M	N	I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Sequence		V	L	A	Y	G	S	I	X	C	G	D	E	L	E	G	G	L	A	.	.	.	.	.	.	.	.	T	P	E	D	Y	G	R	F	A	E	T	L	V	K	R	G	Y	K	G	I	K	L	H	T	W	X	P	P	V	S	W	A	P	.	.	.	.	.	.	.	.	D	V	K	X	D	L	K	A	C	A	A	V	R
Template Known Secondary structure															T	T	T	T	S	.	.	.	.	.	.	.	.	S															T		S									T	T	S	T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.									.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	V	K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V
Query Conservation
Alig confidence					.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation					.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		E	A	V	.	.	.	.	.	.	.	G	P	D	I	R	L	X	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	H	W	Y	S	R	T	D	A	L	A	L	G	R	G	L	.	E	K	L	G	F	D	W	I	E	E	P	X	D	E	Q	S	L	S	S	Y	K	W	L	S	D	N
Template Known Secondary structure					.	.	.	.	.	.	.		T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T														.		T	T	T		S						S		T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		195	.	.								.	.	200	.	.	.	.	.	.																		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	G	D	K	I	Q	L	V	G	D	D	L	F	V	T	N	T	K	.	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G
Query Conservation																				.
Alig confidence									.	.	.									.																																														.
Template Conservation									.	.	.																																																							.
Template Sequence		L	D	I	P	V	V	G	.	.	.	P	E	S	A	A	G	K	H	W	H	R	A	E	W	I	K	A	G	A	C	D	I	L	R	T	G	V	N	D	V	G	G	I	T	P	A	L	K	T	X	H	L	A	E	A	F	G	X	E	C	E	V	H	G	.	N	T	A	X	N	L	H	V	V	A	A	T	K	N	C
Template Known Secondary structure			S	S					.	.	.		S	S		S	S											T	T			S										T	S														T	T								.		S											S	S
Template Predicted Secondary structure									.	.	.																																																							.
Template SS confidence
		250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	A	G	Q	I	K	T	G	S	M	S	R	S	D	R	V	A	K	Y	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	W	Y	E	R	G	L	L	H	P	F	L	E	Y	D	D	G	H	D	Y	L
Template Known Secondary structure											T	T	S		G	G	G			T	T	B
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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