Job Description P0A6P9 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 59 Aligned Residues 301 % Identity 21% Template c1jpmB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:l-ala-d/l-glu epimerase; PDBTitle: l-ala-d/l-glu epimerase Resolution 2.25 Å

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		3	.	.	.	.	.	.	10	.	.															.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	V	K	I	I	G	R	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	S	R	G	N	P	T	V	E	A	E	V	H	L	E	G	G	F	V	G	M	A	A	A	P	S	G	A	S	T	G	S	R	E	A	L	E	L	R	D	G	D	K	S	R	F	L	G	K	G	V	T	K	A	V
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	I	R	I	E	T	S	R	I	A	V	P	L	T	K	P	F	K	T	A	L	R	T	V	Y	T	A	.	.	E	S	V	I	V	R	I	T	Y	D	S	G	A	V	G	W	G	E	A	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	V	I	T	G	D	S	M	D	S	I	E
Template Known Secondary structure		B																				S	S							.	.										T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	T	T		B
Template Predicted Secondary structure																														.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																	.	.	.	.	.	.	.	.	.	60	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	N	G	P	I	A	Q	A	L	I	G	K	D	A	K	D	Q	A	G	I	D	K	I	M	I	D	L	D	G	T	E	N	K	S	K	F	G	A	N	A	I	L	A	V	S	L	A	N	A	K	A	A	A	A	A	K	G	M	P	L	Y	E	H	I	A	E	L	N	G	T	P	G	K	Y	S	M	P	V
Query Conservation
Alig confidence																																			.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Sequence		S	A	I	H	H	V	L	K	P	A	L	L	G	K	S	L	A	G	Y	E	A	I	L	H	D	I	Q	H	L	L	T	G	N	.	.	.	.	.	.	M	S	A	K	A	A	V	E	M	A	L	Y	D	G	W	A	Q	M	C	G	L	P	L	Y	Q	M	L	G	G	Y	R	D	T	.	.	.	.	.	.	.	L
Template Known Secondary structure							T						T	T		B	G	G	G											S	S	S	S		.	.	.	.	.	.																				T	S	B					T	T				S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	M	N	I	I	N	G	G	E	H	A	D	N	N	V	D	I	Q	E	F	M	I	Q	P	V	G	A	K	T	V	K	E	A	I	R	M	G	S	E	V	F	H	H	L	A	K	V	L	K	A	K	G	M	N	T	A	V	G	D	E	G	G	Y	A	P	N	L	G	S	N	A	E	A	L	A	V	I	A	E
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	D	Y	T	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	S	P	E	E	M	A	A	D	A	E	N	Y	L	K	Q	G	F	Q	T	L	K	I	K	V	G	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	A	T	D	I	A	R	I	Q	E	I	R	K
Template Known Secondary structure			B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T									S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.																	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.															.	.	.	170	.	.	.	.	.	.	.	.	.	180
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		A	V	K	A	A	G	Y	E	L	G	K	D	I	T	L	A	M	D	C	A	A	S	E	F	Y	K	D	G	K	Y	V	L	A	G	E	G	N	K	A	F	T	S	E	E	F	T	H	F	L	E	E	L	T	K	.	Q	Y	P	I	V	S	I	E	D	G	L	D	E	S	D	W	D	G	F	A	Y	Q	T	K	V
Query Conservation																																																								.
Alig confidence				.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation				.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	.	.	.	.	.	.	.	G	S	A	V	K	L	R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	Q	G	W	R	P	K	E	A	V	T	A	I	R	K	M	E	D	A	G	L	G	I	E	L	V	E	Q	P	V	H	K	D	D	L	A	G	L	K	K	V	T	D	A
Template Known Secondary structure				.	.	.	.	.	.	.	G	G	G	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S															T	T										S		T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.								.	.	.	.	.	.	.	190	.																		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	D	K	I	Q	L	V	G	D	D	L	F	V	T	N	T	K	I	L	K	E	G	I	E	K	G	I	A	N	S	I	L	I	K	F	N	Q	I	G	S	L	T	E	T	L	A	A	I	K	M	A	K	D	A	G	Y	T	A	V	I	S	H	R	S	G	E	T	E	D	A	T	I	A	D	L	A	V	G	T
Query Conservation
Alig confidence									.	.	.																																																								.
Template Conservation									.	.	.																																																								.
Template Sequence		T	D	T	P	I	M	A	.	.	.	D	E	S	V	F	T	P	R	Q	A	F	E	V	L	Q	T	R	S	A	D	L	I	N	I	K	L	M	K	A	G	G	I	S	G	A	E	K	I	N	A	M	A	E	A	C	G	V	E	C	M	V	G	S	M	I	.	E	T	K	L	G	I	T	A	A	A	H	F	A	A
Template Known Secondary structure			S	S					.	.	.	S	T	T		S	S											T			S										T	S														T	T								S	S	.
Template Predicted Secondary structure									.	.	.																																																								.
Template SS confidence
		237	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.
		388	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	R	N	I
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions