Return to main results Retrieve Phyre Job Id

Job DescriptionP75858
Confidence48.88%DateThu Jan 5 12:15:07 GMT 2012
Rank19Aligned Residues91
% Identity12%Templated1p5vb_
SCOP infoCommon fold of diphtheria toxin/transcription factors/cytochrome f Bacterial adhesins Pilus subunits
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280.........290.........300.........310.........320.........330......
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  AIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPDDADSIARMNVYPVSTT
Query Conservation   
   
                             
 



 
    
  
  
                   
      
Alig confidence 
















.

























.












.......














Template Conservation 





  
    
 
 .   

  
    
 
 
        
.


    
    
.......  
   
  





Template Sequence  SVNFTDAAGDPMYLTFT. SQDGNNHQFTTKVIGKDSRDFDISPK. VNGENLVGDDVVL. . . . . . . ATGSQDFFVRSIGSK
Template Known Secondary structure  G
TT

TT
.SSSS


TT



.TTB
SSS


B
.......
SS
S
Template Predicted Secondary structure 





.

















.










.......







Template SS confidence 















































































   5960.........70..... ....80.........90.........100. ........110.... .....120.........
 
   337..340.........350......
Predicted Secondary structure 






Query SS confidence 



















Query Sequence  GVPPETGRFEATATVRINFD
Query Conservation 
     
 
 
 

  
 
 
Alig confidence 



















Template Conservation     
 

 











Template Sequence  GGKLAAGKYTDAVTVTVSNQ
Template Known Secondary structure  S



SS






Template Predicted Secondary structure 








Template SS confidence 



















   130.........140.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions