Job Description P75931 Confidence 100.00% Date Thu Jan 5 12:16:06 GMT 2012 Rank 28 Aligned Residues 305 % Identity 17% Template c3v5nA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: the crystal structure of oxidoreductase from sinorhizobium meliloti Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.							.	.	60	.		.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																		.																				.	.	.						.	.	.	.	.	.					.
Query SS confidence																																		.																				.	.	.						.	.	.	.	.	.					.
Query Sequence		K	K	L	R	I	G	V	V	G	L	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	W	T	L	Q	G	.	A	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	.	.	.	Y	A	D	S	L	.	.	.	.	.	.	S	S	L	A	.	A	S	C	D	A	V	F	V	H
Query Conservation																																		.																				.	.	.						.	.	.	.	.	.					.
Alig confidence																																		.																				.	.	.						.	.	.	.	.	.					.
Template Conservation
Template Sequence		K	R	I	R	L	G	X	V	G	G	G	A	F	I	G	A	V	H	R	I	A	A	R	L	D	D	H	Y	E	L	V	A	G	A	L	S	S	T	P	E	K	A	E	A	S	G	R	E	L	G	L	D	P	S	R	V	Y	S	D	F	K	E	X	A	I	R	E	A	K	L	K	N	G	I	E	A	V	A	I	V
Template Known Secondary structure										S																T	S											S	S												T			G	G	G	B		S													T	T			S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	T	A	S	H	F	D	V	V	S	T	L	L	N	A	G	V	H	V	C	V	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	V	G	F	N	R	R	F	A	P	L	Y	G	E	L	K	T	Q	L	A	T	A	A	S	L	R	M	D	K	H	R	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	N	H	V	H	Y	A	A	A	K	E	F	L	K	R	G	I	H	V	I	C	D	K	P	L	T	S	T	L	A	D	A	K	K	L	K	K	A	A	D	E	S	D	A	L	F	V	L	T	H	N	Y	T	G	Y	P	X	V	R	Q	A	R	E	X	I	E	N	G	D	I	G	A	V	R	L	V	Q	X	E
Template Known Secondary structure		S		T	T	S										T	T	T							S	S	S		S	S															S	S							G	G	G	G	S												T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		151	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.
Predicted Secondary structure								.	.																																				.	.	.	.												.	.	.	.																	.
Query SS confidence								.	.																																				.	.	.	.												.	.	.	.																	.
Query Sequence		S	V	G	P	H	D	.	.	L	Y	F	T	L	L	D	D	Y	L	H	V	V	D	T	A	L	W	L	S	G	G	K	A	S	L	D	G	G	T	L	L	T	N	D	.	.	.	.	A	G	E	M	L	F	A	E	H	H	F	.	.	.	.	S	A	G	P	L	Q	I	T	T	C	M	H	R	R	A	G	.	S
Query Conservation								.	.																																				.	.	.	.												.	.	.	.																	.
Alig confidence								.	.																																				.	.	.	.												.	.	.	.																	.
Template Conservation
Template Sequence		Y	P	Q	D	W	L	T	E	N	G	G	S	T	G	D	I	G	T	H	A	Y	N	L	G	C	F	V	S	G	L	E	L	E	E	L	A	A	D	L	D	S	F	V	G	G	R	Q	L	D	D	N	A	H	V	L	X	R	F	R	E	K	D	G	T	R	A	K	G	X	L	W	C	S	Q	V	A	P	G	H	E
Template Known Secondary structure						T	T	S									T																											S	T	T			S													B	T	T	B										S			T	T		S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		Q	R	E	T	V	Q	A	V	T	D	G	A	L	I	D	I	T	D	M	R	E	W	R	E	E	R	G	Q	G	V	V	H	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	G	W	Q	S	T	L	E	Q	R	G	F	V	G	C	A	R	H	F	I	E	C	V	Q	N	Q	.
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		N	G	L	X	V	R	V	Y	G	T	K	G	G	L	E	W	T	Q	K	D	P	N	Y	L	W	Y	T	P	F	G	E	P	K	R	L	L	T	R	A	G	A	G	A	S	P	A	A	A	R	V	S	R	I	P	S	G	H	P	E	G	Y	L	E	G	F	A	N	I	Y	S	E	A	A	R	A	I	Y	A	K	R
Template Known Secondary structure		S									S	S							T	T	S	T	T							T	T	S							T	T	S	T	T							T	T			S		T	T	S																					T	T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
					281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	T	V	P	Q	T	A	G	E	Q	A	V	L	A	Q	R	I	V	D	K	I	W	R	D	A	M	S
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		A	D	P	S	V	I	Y	P	T	I	D	D	G	X	R	G	X	T	F	V	D	A	C	V	R	S	S	E	R
Template Known Secondary structure				T	T																									T
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions