Job Description P75931 Confidence 100.00% Date Thu Jan 5 12:16:06 GMT 2012 Rank 7 Aligned Residues 303 % Identity 18% Template c3e18A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of nad-binding protein from listeria innocua Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		M	K	K	L	R	I	G	V	V	G	L	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	W	T	L	Q	G	A	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	Y	A	D	S	L	S	S	L	A	.	.	A	S	C	D	A	V	F	V	H	S	S	T	A	S	H	F	D
Query Conservation																																																															.	.
Alig confidence																			.																														.														.	.
Template Conservation																			.																														.
Template Sequence		L	K	K	Y	Q	L	V	I	V	G	Y	G	G	M	G	S	Y	.	H	V	T	L	A	S	A	A	D	N	L	E	V	H	G	V	F	D	I	L	A	E	K	R	E	A	A	A	Q	.	K	G	L	K	I	Y	E	S	Y	E	A	V	L	A	D	E	K	V	D	A	V	L	I	A	T	P	N	D	S	H	K	E
Template Known Secondary structure													S						.							T	S	T	T									S	S									T	.	T	T			B		S									T	T								S		G	G	G
Template Predicted Secondary structure																			.																														.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		V	V	S	T	L	L	N	A	G	V	H	V	C	V	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	V	G	F	N	R	R	F	A	P	L	Y	G	E	L	K	T	Q	L	A	T	A	A	S	L	R	M	D	K	H	R	S	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	I	S	A	L	E	A	G	K	H	V	V	C	E	K	P	V	T	M	T	S	E	D	L	L	A	I	M	D	V	A	K	R	V	N	K	H	F	M	V	H	Q	N	R	R	W	D	E	D	F	L	I	I	K	E	M	F	E	Q	K	T	I	G	E	M	F	H	L	E	S	R	V	H	G	A	N	G	I	P
Template Known Secondary structure									T	T							S	S			S	S															T								G	G	G	G														T	T	T	S	S											S	S		S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.																																										.	.	.
Query SS confidence		.	.																																										.	.	.
Query Sequence		.	.	N	S	V	G	P	H	D	L	Y	F	T	L	L	D	D	Y	L	H	V	V	D	T	A	L	W	L	S	G	G	K	A	S	L	D	G	G	T	L	L	T	N	.	.	.	D	A	G	E	M	L	F	A	E	H	H	F	S	A	G	P	L	Q	I	T	T	C	M	H	R	R	A	G	S	Q	R	E	T	V
Query Conservation		.	.																																										.	.	.
Alig confidence		.	.																																										.	.	.																																	.
Template Conservation																																																																																.
Template Sequence		G	D	W	R	H	L	K	A	H	G	G	G	M	V	L	D	W	G	V	H	L	L	D	Q	L	L	F	L	V	D	S	N	V	K	S	V	S	A	N	L	S	F	A	L	G	D	E	V	D	D	G	F	V	T	F	I	T	F	E	N	G	I	T	A	Q	I	E	V	G	T	T	N	F	I	K	L	P	R	.	W
Template Known Secondary structure		S	S	G	G	G		G	G	G	T		S					T														S												T	T			S	S		S									T	T	S									S	S		S	S				S	.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.																								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	V	T	D	G	A	L	I	D	I	T	D	M	R	E	W	R	E	E	R	G	Q	G	V	V	H	K	P	I	P	G	W	Q	S	T	L	E	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	V	G	C	A	R	H	F	I	E	C	V	Q	N	Q	T
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	V	K	G	T	E	G	T	G	I	I	H	D	W	D	L	S	G	E	I	V	K	P	T	A	L	A	K	T	S	E	P	T	P	I	K	A	G	Q	G	L	T	K	T	M	A	P	P	S	E	E	A	T	N	T	L	S	L	P	A	P	A	K	L	A	P	S	F	Y	N	N	F	V	D	V	L	N	N	T	S
Template Known Secondary structure						T	T							S	T	T										T	T	T	T	T									T	T				S	T	T	S				G	G	G														S											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	Q	T	A	G	E	Q	A	V	L	A	Q	R	I	V	D	K	I	W	R	D	A	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	I	V	Q	N	E	E	V	Y	Q	V	L	K	L	I	E	A	I	F	E	A	A	E	T
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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