Job Description P75931 Confidence 98.82% Date Thu Jan 5 12:16:06 GMT 2012 Rank 86 Aligned Residues 145 % Identity 13% Template c3c8mA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase from thermoplasma2 volcanium Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.										.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		M	K	K	L	R	I	G	V	V	G	L	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	.	.	.	.	.	.	.	W	T	L	Q	G	A	W	S	.	.	.	.	.	.	.	.	.	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	.	.	.	.	.	Y	A	D	S	L	S	S
Query Conservation																														.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Alig confidence																			.											.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																			.
Template Sequence		X	K	T	I	N	L	S	I	F	G	L	G	N	V	G	L	N	.	L	L	R	I	I	R	S	F	N	E	E	N	R	L	G	L	K	F	N	V	V	F	V	A	D	S	L	H	S	Y	Y	N	E	R	I	D	I	G	K	V	I	S	Y	K	E	K	G	S	L	D	S	L	E	Y	E	S	I	S	A	S	E	A
Template Known Secondary structure													S						.													S	S	S											S	S						T	T												T	T		G	G	G			S
Template Predicted Secondary structure																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																				.	.	.	.																																										.
Query SS confidence																				.	.	.	.																																										.
Query Sequence		L	A	A	S	C	D	A	V	F	V	H	S	S	T	A	S	H	F	.	.	.	.	D	V	V	S	T	L	L	N	A	G	V	H	V	C	V	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	.	V	G	F	N	R	R	F	A	P	L	Y	G	E	L	K	T
Query Conservation																				.	.	.	.																																										.
Alig confidence																				.	.	.	.																						.																				.
Template Conservation																																													.
Template Sequence		L	A	R	D	F	D	I	V	V	D	A	T	P	A	S	A	D	G	K	K	E	L	A	F	Y	K	E	T	F	E	N	G	K	D	V	V	T	A	N	K	S	G	L	.	A	N	F	W	P	E	I	X	E	Y	A	R	S	N	N	R	R	I	R	Y	E	A	T	V	A	G	G	V	P	L	F	S	F	I	D	Y
Template Known Secondary structure				S	S		S						S				S	S	S													T	T												.															T						G	G	G	S	S	T	T	S
Template Predicted Secondary structure																																													.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	T	A	A	S	L	R	M	D	K	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	L	P	S	R	I	K	K	F	R	G	I
Template Known Secondary structure			S	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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