Job Description P75931 Confidence 100.00% Date Thu Jan 5 12:16:06 GMT 2012 Rank 39 Aligned Residues 293 % Identity 17% Template c3c1aB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (zp_00056571.1) from2 magnetospirillum magnetotacticum ms-1 at 1.85 a resolution Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		K	K	L	R	I	G	V	V	G	L	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	W	T	L	Q	G	A	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	Y	A	D	S	L	S	S	L	A	.	.	A	S	C	D	A	V	F	V	H	S	S	T	A	S	H	F	D	V
Query Conservation																																																														.	.
Alig confidence																		.																														.	.													.	.
Template Conservation																		.																														.	.
Template Sequence		S	P	V	R	L	A	L	I	G	A	G	R	W	G	K	N	.	Y	I	R	T	I	A	G	L	P	G	A	A	L	V	R	L	A	S	S	N	P	D	N	L	A	L	V	P	P	.	.	G	C	V	I	E	S	D	W	R	S	V	V	S	A	P	E	V	E	A	V	I	I	A	T	P	P	A	T	H	A	E	I
Template Known Secondary structure												T	T	T	T		S	.							T		T	T									S						T	T			T	.	.	T					S							T		S	S								S		G	G	G
Template Predicted Secondary structure																		.																														.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		V	S	T	L	L	N	A	G	V	H	V	C	V	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	V	G	F	N	R	R	F	A	P	L	Y	G	E	L	K	T	Q	L	A	T	A	A	S	L	R	M	D	K	H	R	S	.	.	.	.	N	S	V	G	P	H
Query Conservation																																																																								.	.	.	.
Alig confidence																																																											.	.												.	.	.	.
Template Conservation																																																											.	.
Template Sequence		T	L	A	A	I	A	S	G	K	A	V	L	V	E	K	P	L	T	L	D	L	A	E	A	E	A	V	A	A	A	A	K	A	T	G	V	X	V	W	V	E	H	T	Q	L	F	N	P	A	W	E	A	L	K	A	D	L	.	.	T	S	I	G	P	I	L	A	V	R	S	E	A	G	N	H	G	P	Y	R	P
Template Known Secondary structure									T							S	S	S		S																								G	G	G	G										T	G	.	.	G	G	G		S																T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		D	L	Y	F	T	L	L	D	D	Y	L	H	V	V	D	T	A	L	W	L	S	G	G	K	A	S	L	D	G	G	T	L	L	T	N	.	.	.	D	A	G	E	M	L	F	A	E	H	H	F	S	A	G	P	L	Q	I	T	T	C	M	H	R	R	A	G	S	Q	R	E	T	V	Q	A	V	T	D	G	A	L
Query Conservation																																					.	.	.
Alig confidence																																					.	.	.																									.
Template Conservation																																																																.
Template Sequence		G	G	V	P	X	L	W	D	W	G	A	H	D	V	S	X	V	L	D	L	X	G	R	D	P	D	S	T	S	A	S	W	A	A	R	G	E	K	D	G	G	E	A	G	D	V	T	L	T	L	A	F	S	T	V	E	A	H	I	R	L	C	.	N	T	X	D	K	C	R	R	L	A	V	F	G	E	A	G	T
Template Known Secondary structure		T																					S	S			S													T	T													T	T									.	T													S	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		I	D	I	T	D	M	R	E	W	R	E	E	R	G	Q	G	V	V	H	K	P	I	P	G	.	.	.	.	W	Q	S	T	L	E	Q	R	G	F	V	G	C	A	R	H	F	I	E	C	V	Q	N	Q	T	V	P	Q	T	A	G	E	Q	A	V	L	A	Q	R	I	V	D	K	I
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.
Template Conservation
Template Sequence		L	V	X	D	D	R	A	T	D	K	L	T	L	H	P	P	Q	P	D	G	N	W	P	V	G	Q	G	H	A	L	T	V	T	D	E	X	P	L	T	R	A	V	R	L	F	A	G	A	V	R	Q	P	E	P	G	P	S	P	L	E	L	G	L	R	V	V	R	V	L	G	A	C
Template Known Secondary structure						T	T	S	S	S	S								S	S						S																								S	S	S					S	S	B														T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions