Job Description P75931 Confidence 100.00% Date Thu Jan 5 12:16:06 GMT 2012 Rank 31 Aligned Residues 305 % Identity 15% Template c3btuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k] Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure												.	.	.																.																											.	.	.										.	.
Query SS confidence												.	.	.																.																											.	.	.										.	.
Query Sequence		K	K	L	R	I	G	V	V	G	L	.	.	.	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	.	S	D	W	T	L	Q	G	A	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	.	.	.	Y	A	D	S	L	S	S	L	A	.	.	A	S	C	D	A	V	F	V	H	S	S
Query Conservation												.	.	.																.																											.	.	.										.	.
Alig confidence												.	.	.																.																											.	.	.										.	.
Template Conservation
Template Sequence		A	P	I	R	V	G	F	V	G	L	N	A	A	K	G	W	A	I	K	T	H	Y	P	A	I	L	Q	L	S	S	Q	F	Q	I	T	A	L	Y	S	P	K	I	E	T	S	I	A	T	I	Q	R	L	K	L	S	N	A	T	A	F	P	T	L	E	S	F	A	S	S	S	T	I	D	M	I	V	I	A	I	Q
Template Known Secondary structure										S			S	S	S	S	S	G	G	G	T								T	T	T	T									S	S											T	T		T	T					S	S								S	S		S						S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		T	A	S	H	F	D	V	V	S	T	L	L	N	A	G	.	.	.	.	.	.	V	H	V	C	V	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	V	G	F	N	R	R	F	A	P	L	Y	G	E	L	K	T	Q	L	A	T	A	A	S	L	R	M	D	K
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	S	H	Y	E	V	V	M	P	L	L	E	F	S	K	N	N	P	N	L	K	Y	L	F	V	E	W	A	L	A	C	S	L	D	Q	A	E	S	I	Y	K	A	A	A	E	R	G	V	Q	T	I	I	S	L	Q	G	R	K	S	P	Y	I	L	R	A	K	E	L	I	S	Q	G	Y	I	G	D	I	N	S
Template Known Secondary structure		G	G	G												G	G	G		T	T								S	S			S	S															T								G	G	G	G													T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		147	.																		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	S	V	G	P	H	D	L	Y	F	T	L	L	D	D	Y	L	H	V	V	D	T	A	L	W	L	S	G	G	K	A	S	L	D	G	G	T	L	L	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	I	A	G	N	G	G	W	Y	G	Y	E	R	P	V	K	S	P	K	Y	I	Y	E	I	G	N	G	V	D	L	V	T	T	T	F	G	H	T	I	D	I	L	Q	Y	M	T	S	S	Y	F	S	R	I	N	A	M	V	F	N	N	I	P	E	Q	E	L	I	D	E	R	G	N	R	L	G	Q	R	V	P
Template Known Secondary structure									S	S		S	S				T	T	S		G	G	G	G	S	T	T	S	S		S	T	T	T	T														T															S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
			191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.									240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure		.																										.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence		.																										.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		.	D	A	G	E	M	L	F	A	E	H	H	F	S	A	G	P	L	Q	I	T	T	C	M	H	R	.	.	.	.	R	A	G	S	Q	R	E	T	V	Q	A	V	T	D	G	A	L	I	D	I	T	D	M	R	.	.	.	.	.	.	.	.	E	W	R	E	E	R	G	Q	G	V	V	H	K	P	I	P	G	W
Query Conservation		.																										.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence		.																										.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	V	P	D	H	L	L	F	Q	G	T	L	L	N	G	N	V	P	V	S	C	S	F	K	G	G	K	P	T	K	K	F	T	K	N	L	V	I	D	I	H	G	T	K	G	D	L	K	L	E	G	D	A	G	F	A	E	I	S	N	L	V	L	Y	Y	S	G	T	R	K	E	I	M	K	V	Y	H	L	R
Template Known Secondary structure				S		S									T	T	T	T										S	S	S			S	S	S		S								S	S								S	S	S		G	G	G																					T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.										280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	T	L	E	Q	R	G	F	V	G	C	A	R	H	F	I	E	C	V	Q	N	.	.	.	.	.	.	.	.	.	Q	T	V	P	Q	T	A	G	E	Q	A	V	L	A	Q	R	I	V	D	K	I	W	R	D	A	M	S
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	N	A	I	V	G	N	I	H	R	L	Y	Q	S	I	S	D	F	H	F	N	T	S	Q	F	V	M	Q	G	F	D	F	E	G	F	P	T	L	M	D	A	L	I	L	H	R	L	I	E	S	V	Y	K	S	N	M	M
Template Known Secondary structure		T																				T	T					S			T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions