Job Description P75931 Confidence 99.08% Date Thu Jan 5 12:16:06 GMT 2012 Rank 82 Aligned Residues 177 % Identity 15% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																																				.	.
Query SS confidence												.																																																				.	.
Query Sequence		K	K	L	R	I	G	V	V	G	L	.	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	W	T	L	Q	G	A	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	Y	A	D	S	L	S	S	L	A	A	.	.	S	C	D	A	V	F	V	H	S	S	T	A	S	H	F	D
Query Conservation												.																																																				.	.
Alig confidence												.					.											.															.	.	.	.																		.	.
Template Conservation																	.											.															.	.	.	.
Template Sequence		E	N	T	K	A	I	V	Q	G	I	T	G	R	Q	G	.	S	F	H	T	K	K	M	L	E	C	.	G	T	K	I	V	G	G	V	T	P	G	K	G	G	.	.	.	.	Q	N	V	H	G	V	P	V	F	D	T	V	K	E	A	V	K	E	T	D	A	N	A	S	V	I	F	V	P	A	P	F	A	K	D
Template Known Secondary structure		T	T							T	T	T	S				.										T	.	T									T	T		T	T	.	.	.	.				T	T					S	S
Template Predicted Secondary structure																	.											.															.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																												.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	S	T	L	L	N	A	G	V	H	V	C	V	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	F	N	R	R	F	A	P	L	Y	G	E
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	F	E	A	I	D	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	H	D	T	M	E	F	V	N	Y	A	E	D	V	G	V	K	I	I	G	P	N	T	P	G	I	A	S	P	K	V	G	K	L	G	I	I	P	M	E	V	L	K	E	G	S	V	G	M	V	S	R	S	G	T	L	T	Y	E
Template Known Secondary structure									T	T		S							S																		T						S	S							T	T	T								G	G	G											S		S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	T	Q	L	A	T	A	A	S	L	R	M	D	K	H	R	S	N	S	V	G	P	H	D	L	Y	F	T	L	L	D	D	Y	L	H	V	V	D	T	A	L	W	L	S	G	G	K	A	S	L	D	G	G	T	L	L	T	N	D	A	G
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.
Template Sequence		I	A	H	Q	I	K	K	A	G	F	G	V	S	T	C	V	.	.	.	.	.	.	.	.	.	G	I	G	G	D	P	I	V	G	L	R	Y	K	E	V	L	D	L	F	E	K	D	D	E	T	E	A	I	V	M	I	G	E	I	G	G	G
Template Known Secondary structure									T	T								.	.	.	.	.	.	.	.	.				S	S	S	S		S	S											T		T	T		S								S	S	S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.										.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions