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Job Description | P75931 | Confidence | 97.28% | Date | Thu Jan 5 12:16:06 GMT 2012 |
Rank | 235 | Aligned Residues | 94 |
% Identity | 19% | Template | c2v6bB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:l-lactate dehydrogenase; |
PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form)
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Resolution | 2.50 Å |
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4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
L | R | I | G | V | V | G | L | G | G | I | A | Q | K | A | W | L | P | V | L | A | A | A | S | D | W | T | L | Q | G | A | W | S | P | T | R | A | K | A | L | P | I | C | E | S | W | . |
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R | I | P | Y | A | D | S | L | S | S | L | A | A | S | C | D | A | V | F | V | H | S | S | T | A | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | K | V | G | V | V | G | T | G | F | V | G | S | T | . |
A | A | F | A | L | V | L | R | G | S | C | S | E | L | V | L | V | D | R | D | E | D | R | A | Q | A | E | A | E | D | I | A | H | A | A | P | V | S | H | G | T | R | V | W | H | G | G | H | S | E | L | A | D | A | Q | V | V | I | L | T | A | G | A | E | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
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76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
H | F | D | V | V | S | T | L | L | N | A | G | V | H | V | C | V | D | K | P | L | A | E | N | L | R | D | A | E | R | L | V | E | L | A | A | R | K | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | L | D | L | L | E | K | . |
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N | A | D | I | F | R | E | L | V | P | Q | I | T | R | A | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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109 | 110 | . | . | . | . | . | |
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. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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