Job Description P75931 Confidence 98.52% Date Thu Jan 5 12:16:06 GMT 2012 Rank 101 Aligned Residues 126 % Identity 13% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	L	R	I	G	V	V	G	L	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	W	T	L	Q	G	A	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	Y	A	D	S	L	S	S	L	A	A	S	C	D	A	V	F	V	H	S	S	T	A	S	H	F	D	V	V	S
Query Conservation
Alig confidence																.										.							.																.
Template Conservation																.										.							.																.
Template Sequence		T	D	K	K	I	G	F	L	G	L	G	L	M	G	.	S	G	I	V	S	N	L	L	K	.	M	G	H	T	V	T	.	V	W	N	R	T	A	E	K	C	D	L	F	I	Q	E	.	G	A	R	L	G	R	T	P	A	E	V	V	S	T	C	D	I	T	F	A	C	V	S	D	P	K	A	A	K	D	L	V
Template Known Secondary structure			S	S								S				.										.	T	T					.				S	S	G	G	G	G						T	.	T					S										S							S	S
Template Predicted Secondary structure																.										.							.																.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.		.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		T	L	L	N	A	G	V	H	V	C	V	D	K	P	L	A	E	.	.	.	.	.	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	V	G	F	N	R	R	F	A	P	L	Y	G	E
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.
Template Conservation
Template Sequence		L	G	P	S	G	V	L	Q	G	I	R	P	G	K	C	Y	V	D	M	S	T	V	D	A	D	T	V	T	E	L	A	Q	V	I	V	S	R	G	G	R	F	L	E	A	P	V	S	G	N	Q	Q	L	S	N	D
Template Known Secondary structure			S	T	T		G	G	G	G			T	T							S																	T	T										S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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