Return to main results Retrieve Phyre Job Id

Job DescriptionP75931
Confidence98.47%DateThu Jan 5 12:16:06 GMT 2012
Rank106Aligned Residues111
% Identity12%Templatec2nu8D_
PDB info PDB header:ligaseChain: D: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30.........40.........50.........60... ......70........
Predicted Secondary structure 



.















..







Query SS confidence 









.



















































. .














Query Sequence  KKLRIGVVGL. GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAAS. . CDAVFVHSSTASHFD
Query Conservation    


 


 .
          
       



 
                       
   .. 
 
 
 
    
  
Alig confidence 









.



.









.












....


















..














Template Conservation 
  

 


 

  
.          .
  


 


   ....
  
 


 
 

 

      




 


  
  
Template Sequence  KNTKVICQGFTGSQG. TFHSEQAIAY. GTKMVGGVTPGKG. . . . GTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKD
Template Known Secondary structure  TT
TTTS..T

TT
T....T
TTSS





GGG
Template Predicted Secondary structure 





.
.







....















Template SS confidence 















































































   6...10.........20 .........30 .........40... ......50.........60.........70.........
 
   7980.........90.........100.........110........
Predicted Secondary structure 













Query SS confidence 







































Query Sequence  VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLM
Query Conservation       
  

 
  


 
    

  
   
        
Alig confidence 







































Template Conservation   
 
    


  

 
 

 
     
   
   
 


Template Sequence  SILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI
Template Known Secondary structure  TT







T
Template Predicted Secondary structure 










Template SS confidence 







































   80.........90.........100.........110.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions