Job Description P75931 Confidence 98.67% Date Thu Jan 5 12:16:06 GMT 2012 Rank 91 Aligned Residues 196 % Identity 17% Template c2jcyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate2 reductoisomerase, dxr, rv2870c, from mycobacterium3 tuberculosis Resolution 2.35 Å

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		3	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																				.	.	.	.	.	.
Predicted Secondary structure											.																		.								.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																		.								.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	R	I	G	V	V	G	L	.	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	.	W	T	L	Q	G	A	W	.	.	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	S	L	S	S
Query Conservation											.																		.								.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.					.													.								.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		R	L	R	V	V	V	L	G	S	T	G	S	I	G	.	T	Q	A	L	Q	V	I	A	D	N	P	D	R	F	E	V	V	G	L	A	A	G	G	A	H	L	D	T	L	L	R	Q	R	A	Q	T	G	V	T	N	I	A	V	A	D	E	H	A	A	Q	R	V	G	D	I	P	Y	H	G	S	D	A	A	T	R
Template Known Secondary structure									S	T	T	S				.											T	T	T										S	S																				S	S											S			S	T	T
Template Predicted Secondary structure																.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure				.	.																																.
Query SS confidence				.	.																																.
Query Sequence		L	A	.	.	A	S	C	D	A	V	F	V	H	S	S	T	A	S	H	F	D	V	V	S	T	L	L	N	A	G	V	H	V	C	V	.	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	V	G	F	N	R	R	F	A	P	L	Y	G	E	L	K	T	Q	L
Query Conservation				.	.																																.
Alig confidence				.	.																																.				.	.																			.	.	.	.	.	.	.
Template Conservation																																									.	.																			.	.	.	.	.	.	.
Template Sequence		L	V	E	Q	T	E	A	D	V	V	L	N	A	L	V	G	A	L	G	L	R	P	T	L	A	A	L	K	T	G	A	R	L	A	L	A	N	K	E	.	.	S	L	V	A	G	G	S	L	V	L	R	A	A	R	P	G	Q	I	.	.	.	.	.	.	.	V	P	V	N	S	E	H	S	A	L	A	Q	C	L
Template Known Secondary structure						S			S								G	G	G	G										T	T								S		.	.				T	T										T	T			.	.	.	.	.	.	.				S										G
Template Predicted Secondary structure																																									.	.																			.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																															160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	A	A	S	L	R	M	D	K	H	R	S	N	S	V	G	P	H	D	L	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	D	D	Y	L	H	V	V	D	T	A	L	W	L	S	G	G	K	A	S	L	D	G	G	T
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																																																			.
Template Sequence		R	G	G	T	P	D	E	V	A	K	L	V	L	T	A	S	G	G	P	F	R	G	W	S	A	A	D	L	E	H	V	T	P	E	Q	A	G	A	H	P	T	W	S	M	G	P	M	N	T	L	N	S	A	S	L	V	N	K	G	L	Q	V	I	E	T	.	H	L	L	F	G	I	P	Y	D	R	I	D	V	V
Template Known Secondary structure		G	G	S		G	G	G												T	T	T	T							T	T							T	S	S		S	S	S												T											.								G	G	G
Template Predicted Secondary structure																																																																			.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	N	D	A	G	E	M	L	F	A	E	H	H	F	S	A	G	P	L	Q	I	T	T	C
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		V	H	P	Q	.	.	.	S	I	I	H	S	M	V	T	F	I	D	G	S	T	I	A	Q	A	S
Template Known Secondary structure				T	T	.	.	.										T	T	S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		241	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions