Return to main results Retrieve Phyre Job Id

Job DescriptionP75931
Confidence95.38%DateThu Jan 5 12:16:06 GMT 2012
Rank415Aligned Residues103
% Identity13%Templatec2hlpB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the e267r mutant of a halophilic2 malate dehydrogenase in the apo form
Resolution2.59 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10 .........20.........30...... ...40......... 50.........60.........70...
Predicted Secondary structure 
.






..


........











Query SS confidence 





.

























. .












. . . . . . . .























Query Sequence  RIGVVG. LGGIAQKAWLPVLAAASDWTLQGAWS. . PTRAKALPICESW. . . . . . . . RIPYADSLSSLAASCDAVFVHSST
Query Conservation 

 


. 
          
       



 
..             ........          
    
 
 
 
  
Alig confidence 





.




.



















..












........























Template Conservation 

 



 
 

.  
   
       

 
 
             

                  

  




  
  
Template Sequence  KVSVVGAAGTVG. AAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI
Template Known Secondary structure  TTTS.TT

S

GGGTTT




GGGGTT
S



Template Predicted Secondary structure 



.






















Template SS confidence 















































































   23......30.... .....40.........50.........60.........70.........80.........90.........100.
 
   74.....80.........90.........100.........110.........
Predicted Secondary structure 
















Query SS confidence 













































Query Sequence  ASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMV
Query Conservation    
       
  

 
  


 
    

  
   
        
Alig confidence 












...........





















Template Conservation               ........... 
      
   
       

Template Sequence  PRQPGQTRIDLAG. . . . . . . . . . . DNAPIMEDIQSSLDEHNDDYIS
Template Known Secondary structure 


TT

...........TT
SS
Template Predicted Secondary structure 






...........


Template SS confidence 













































   101........110... ......120.........130.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions