Job Description P75931 Confidence 100.00% Date Thu Jan 5 12:16:06 GMT 2012 Rank 15 Aligned Residues 300 % Identity 16% Template c2glxD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:1,5-anhydro-d-fructose reductase; PDBTitle: crystal structure analysis of bacterial 1,5-af reductase Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																		.										.	.
Query SS confidence																																																		.										.	.
Query Sequence		R	I	G	V	V	G	L	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	W	T	L	Q	G	A	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	.	Y	A	D	S	L	S	S	L	A	.	.	A	S	C	D	A	V	F	V	H	S	S	T	A	S	H	F	D	V	V	S
Query Conservation																																																		.										.	.
Alig confidence															.																																			.										.	.
Template Conservation															.
Template Sequence		R	W	G	L	I	G	A	S	T	I	A	R	E	.	W	V	I	G	A	I	R	A	T	G	G	E	V	V	S	M	M	S	T	S	A	E	R	G	A	A	Y	A	T	E	N	G	I	G	K	S	V	T	S	V	E	E	L	V	G	D	P	D	V	D	A	V	Y	V	S	T	T	N	E	L	H	R	E	Q	T	L
Template Known Secondary structure															.	T							T	T	T									S												T	T		S			B	S							T		T	T								S		G	G	G
Template Predicted Secondary structure															.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	L	N	A	G	V	H	V	C	V	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	V	G	F	N	R	R	F	A	P	L	Y	G	E	L	K	T	Q	L	A	T	A	A	S	L	R	M	D	K	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	I	R	A	G	K	H	V	L	C	E	K	P	L	A	M	T	L	E	D	A	R	E	M	V	V	A	A	R	E	A	G	V	V	L	G	T	N	H	H	L	R	N	A	A	A	H	R	A	M	R	D	A	I	A	E	G	R	I	G	R	P	I	A	A	R	V	F	H	A	V	Y	L	P	P	H	L	Q	G
Template Known Secondary structure						T	T							S	S			S	S														T	T									G	G	G	S												T	T	T	T	S	S											B			G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		S	N	S	V	G	P	H	D	L	Y	F	T	L	L	D	D	Y	L	H	V	V	D	T	A	L	W	L	S	G	G	K	A	S	L	D	G	G	T	L	L	T	N	.	.	.	.	.	D	A	G	E	M	L	F	A	E	H	H	F	S	A	G	P	L	Q	I	T	T	C	M	H	R	R	A	G	S	Q	R	E	T
Query Conservation																																												.	.	.	.	.
Alig confidence																																												.	.	.	.	.																																	.
Template Conservation																																																																																	.
Template Sequence		W	R	L	E	R	P	E	A	G	G	G	V	I	L	D	I	T	V	H	D	A	D	T	L	R	F	V	L	N	D	D	P	A	E	A	V	A	I	S	H	S	A	G	M	G	K	E	G	V	E	D	G	V	M	G	V	L	R	F	Q	S	G	V	I	A	Q	F	H	D	A	F	T	T	K	F	A	E	T	G	.
Template Known Secondary structure		G	G	G	S		G	G	G	T		S					T												T	T														S	S	S		S	S			S									T	T	S									S	B		T	T					.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	A	V	T	D	G	A	L	I	D	I	T	D	M	R	E	W	R	E	E	R	G	Q	G	V	V	H	K	P	I	P	G	W	Q	S	T	L	E	Q	R	G	F	V	G	C	A	R	H	F	I	E	C	V	Q	N	Q	T	V	P	Q	T	A	G	E	Q	A	V	L	A	Q	R	I	V	D	K	I	W	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	V	H	G	T	E	G	S	L	I	G	R	N	V	M	T	Q	K	P	V	G	T	V	T	L	R	N	A	E	G	E	S	Q	L	P	L	D	P	A	N	L	Y	E	T	A	L	A	A	F	H	S	A	I	E	G	H	G	Q	P	S	A	T	G	E	D	G	V	W	S	L	A	T	G	L	A	V	V	K	A
Template Known Secondary structure							S	S							S		S	S	S	S	S								S	S	S																										T	S				S	S	B
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		304	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		321	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions