Job Description P75931 Confidence 99.27% Date Thu Jan 5 12:16:06 GMT 2012 Rank 76 Aligned Residues 100 % Identity 15% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		K	K	L	R	I	G	V	V	G	L	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	W	T	L	Q	G	A	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	Y	A	D	S	L	S	S	L	A	.	A	S	C	D	A	V	F	V	H	S	S	T	A	S	H	F	D	V	V
Query Conservation																																																														.
Alig confidence																.																																														.
Template Conservation																.
Template Sequence		R	K	W	G	L	C	I	V	G	M	G	R	L	G	.	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	R	G	G	V	I	E	H	V	D	L	L	P	Q	R	V	P	G	R	I	E	I	A	L	L	T	V	P	R	E	A	A	Q	K	A	A
Template Known Secondary structure		S										S				.							S				S	S									S		T	T	T	T	T				T	T						G	G	G					S	T	T	T								S
Template Predicted Secondary structure																.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		81	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		S	T	L	L	N	A	G	.	V	H	V	C	V	D	K	P	L	A	E	N	L	R	D
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		D	L	L	V	A	A	G	I	K	G	I	L	N	F	A	P	V	V	L	E	V	P	K
Template Known Secondary structure								T								S	S	S						T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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