Job Description P75931 Confidence 100.00% Date Thu Jan 5 12:16:06 GMT 2012 Rank 19 Aligned Residues 293 % Identity 19% Template c1zh8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of oxidoreductase (tm0312) from thermotoga maritima2 at 2.50 a resolution Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																													.																									.										.	.
Query SS confidence																													.																									.										.	.
Query Sequence		K	K	L	R	I	G	V	V	G	L	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	.	W	T	L	Q	G	A	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	.	Y	A	D	S	L	S	S	L	A	.	.	A	S	C	D	A	V	F	V	H	S	S	T	A	S	H	F
Query Conservation																													.																									.										.	.
Alig confidence																													.																									.										.	.
Template Conservation
Template Sequence		R	K	I	R	L	G	I	V	G	C	G	I	A	A	R	E	L	H	L	P	A	L	K	N	L	S	H	L	F	E	I	T	A	V	T	S	R	T	R	S	H	A	E	E	F	A	K	X	V	G	N	P	A	V	F	D	S	Y	E	E	L	L	E	S	G	L	V	D	A	V	D	L	T	L	P	V	E	L	N	L
Template Known Secondary structure												S						T							T	T	T	T	T									S	S												S	S					S							T	T	T			S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		D	V	V	S	T	L	L	N	A	G	V	H	V	C	V	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	V	G	F	N	R	R	F	A	P	L	Y	G	E	L	K	T	Q	L	A	T	A	A	S	L	R	M	D	K	H	R	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	I	E	K	A	L	R	K	G	V	H	V	I	C	E	K	P	I	S	T	D	V	E	T	G	K	K	V	V	E	L	S	E	K	S	E	K	T	V	Y	I	A	E	N	F	R	H	V	P	A	F	W	K	A	K	E	L	V	E	S	G	A	I	G	D	P	V	F	X	N	W	Q	I	W	V	G	X	D	E
Template Known Secondary structure									T	T	T							S	S	S	S	S	S														S	S	S							G	G	G	G													T	T	T	T	S	S										B				T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
									149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																											.	.	.
Query SS confidence		.	.	.	.	.	.	.																																											.	.	.
Query Sequence		.	.	.	.	.	.	.	S	N	S	V	G	P	H	D	L	Y	F	T	L	L	D	D	Y	L	H	V	V	D	T	A	L	W	L	S	G	G	K	A	S	L	D	G	G	T	L	L	T	N	.	.	.	D	A	G	E	M	L	F	A	E	H	H	F	S	A	G	P	L	Q	I	T	T	C	M	H	R	R	A	G
Query Conservation		.	.	.	.	.	.	.																																											.	.	.
Alig confidence		.	.	.	.	.	.	.																																											.	.	.
Template Conservation
Template Sequence		N	N	K	Y	V	H	T	D	W	R	K	K	P	K	H	V	G	G	F	L	S	D	G	G	V	H	H	A	A	A	X	R	L	I	L	G	E	I	E	W	I	S	A	V	A	K	D	L	S	P	L	L	G	G	X	D	F	L	S	S	I	F	E	F	E	N	G	T	V	G	N	Y	T	I	S	Y	S	L	K	G
Template Known Secondary structure		T		S	G	G	G						T	T		S	T	T	T																																S	S	S	S	S											T	T	S									S	S		B
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		S	Q	R	E	T	V	Q	A	V	T	D	G	A	L	I	D	I	T	D	M	R	E	W	R	E	E	R	G	Q	G	V	V	H	K	P	I	P	G	W	Q	S	T	L	E	Q	R	G	F	V	G	C	A	R	H	F	I	E	C	V	Q	N	Q	T	V	P	Q	.	T	A	G	E	Q	A	V	L	A	Q	R	I	V
Query Conservation																																																																				.
Alig confidence					.	.																					.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation					.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	R	.	.	F	E	I	T	G	T	K	G	K	I	S	I	S	W	D	K	I	V	L	N	.	.	.	.	.	.	.	.	.	.	.	E	E	E	X	K	V	P	Q	E	N	S	Y	Q	K	E	F	E	D	F	Y	Q	V	V	A	E	G	K	P	N	D	L	G	S	P	V	Q	A	L	K	D	L	A	F	I
Template Known Secondary structure					.	.						S	S							T	T					T	.	.	.	.	.	.	.	.	.	.	.	T																							T	T					S	S	S
Template Predicted Secondary structure					.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.												.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		298	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	I	W	R	D	A	M	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	C	V	R	S	A	G	N	K
Template Known Secondary structure								T	T	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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