Job Description P75931 Confidence 98.84% Date Thu Jan 5 12:16:06 GMT 2012 Rank 85 Aligned Residues 199 % Identity 11% Template c1r0lD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from2 zymomonas mobilis in complex with nadph Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure												.																		.							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																		.							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	L	R	I	G	V	V	G	L	.	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	.	W	T	L	Q	G	A	.	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	R	I	P	Y	A	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.																		.							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.					.													.							.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		Q	P	R	T	V	T	V	L	G	A	T	G	S	I	G	.	H	S	T	L	D	L	I	E	R	N	L	D	R	Y	Q	V	I	A	L	T	A	N	R	N	V	K	D	L	A	D	A	A	K	R	T	N	A	K	R	A	V	I	A	D	P	S	L	Y	N	D	L	K	E	A	L	A	G	S	S	V	E	A	A	A
Template Known Secondary structure										T	T	T	S				.										T	T	T	T									S	S													T		S					S		G	G	G								T	T	T		S
Template Predicted Secondary structure																	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
							57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.	.	.	.																																					.
Query SS confidence		.	.	.	.	.																																					.
Query Sequence		.	.	.	.	.	L	S	S	L	A	A	S	C	D	A	V	F	V	H	S	S	T	A	S	H	F	D	V	V	S	T	L	L	N	A	G	V	H	V	C	V	.	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	K	L	T	L	M	V	G	F	N	R	R	F	A	P	L	Y	G
Query Conservation		.	.	.	.	.																																					.
Alig confidence		.	.	.	.	.																																					.				.	.																						.	.	.	.	.
Template Conservation																																															.	.																						.	.	.	.	.
Template Sequence		G	A	D	A	L	V	E	A	A	M	M	G	A	D	W	T	M	A	A	I	I	G	C	A	G	L	K	A	T	L	A	A	I	R	K	G	K	T	V	A	L	A	N	K	E	.	.	S	L	V	S	A	G	G	L	M	I	D	A	V	R	E	H	G	T	T	L	L	.	.	.	.	.	P	V	D	S	E	H	N
Template Known Secondary structure		S									T	S			S								S	G	G	G										T	T	S							T		.	.																	T					.	.	.	.	.			S
Template Predicted Secondary structure																																															.	.																						.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																									160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	K	T	Q	L	A	T	A	A	S	L	R	M	D	K	H	R	S	N	S	V	G	P	H	D	L	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	D	D	Y	L	H	V	V	D	T	A	L	W	L	S	G	G	K	A	S	L	D	G	G	T
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																																																			.
Template Sequence		A	I	F	Q	C	F	P	H	H	N	R	D	Y	V	R	R	I	I	I	T	A	S	G	G	P	F	R	T	T	S	L	A	E	M	A	T	V	T	P	E	R	A	V	Q	H	A	K	I	S	I	D	S	A	T	M	M	N	K	G	L	E	L	I	E	A	.	F	H	L	F	Q	I	P	L	E	K	F	E	I	L
Template Known Secondary structure									T	T		G	G	G												T	T	T	T							T	T							S												T											.								G	G	G
Template Predicted Secondary structure																																																																			.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	N	D	A	G	E	M	L	F	A	E	H	H	F	S	A	G	P	L	Q	I	T	T	C
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		V	H	P	Q	.	.	.	S	V	I	H	S	M	V	E	Y	L	D	G	S	I	L	A	Q	I	G
Template Known Secondary structure				T	T	.	.	.										T	T	S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions