Return to main results Retrieve Phyre Job Id

Job DescriptionP75931
Confidence98.22%DateThu Jan 5 12:16:06 GMT 2012
Rank128Aligned Residues113
% Identity16%Templatec1pgqA_
PDB info PDB header:oxidoreductase (choh(d)-nadp+(a))Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: crystallographic study of coenzyme, coenzyme analogue and substrate2 binding in 6-phosphogluconate dehydrogenase: implications for nadp3 specificity and the enzyme mechanism
Resolution3.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40......... 50.........60..... ....70....
Predicted Secondary structure 












....








...



Query SS confidence 















































. . . .















. . .








Query Sequence  KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW. . . . RIPYADSLSSLAASCD. . . AVFVHSSTA
Query Conservation    


 


 
          
       



 
             ....          
    
... 
 
 
   
Alig confidence 


























...

















....















...








Template Conservation   

 






 

  

 

   
  ...
 



       
   

       
 
  


  
  





 

  
Template Sequence  AQADIALIGLAVMGQNLILNMNDHGFV. . . VCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAG
Template Known Secondary structure 

BS

STT

...
SSTTTTTTSS

SSB
SS


S
S
Template Predicted Secondary structure 









...






















Template SS confidence 















































































   1........10.........20....... ..30.........40.........50.........60.........70.......
 
   75....80......... 90.........100.........110........
Predicted Secondary structure 




...










Query SS confidence 














. . .




























Query Sequence  SHFDVVSTLLNAGVH. . . VCVDKPLAENLRDAERLVELAARKKLTLM
Query Conservation   
       
  

 ...
  


 
    

  
   
        
Alig confidence 














...




.






















Template Conservation    

 

  
   
  
 



 .


    
   
  
   

 

Template Sequence  QAVDNFIEKLVPLLDIGDIIIDG. GNSEYRDTMRRCRDLKDKGILFV
Template Known Secondary structure  TTT

TT

.S


TT
Template Predicted Secondary structure 






.






Template SS confidence 














































   78.80.........90.........100 .........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions