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1 | . | . | . | . | . | . | . | . | |
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10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
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. | . | . | 30 | . | . | . | . | . | . | |
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. | . | . | 40 | . | . | . | . | . | . | . | . | . | |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
| . |
Query SS confidence |   |
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| . |
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| . |
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| . |
Query Sequence |   |
M | K | K | L | R | I | G | V | V | . |
. |
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G | L | G | G | I | A | Q | K | A | W | L | P | V | L | A | A | A | . |
. |
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S | D | W | T | L | Q | G | A | W | S | . |
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P | T | R | A | K | A | L | P | I | C | E | S | W | . |
Query Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . |   |   |   |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
Alig confidence |   |
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| . | . | . |
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Template Conservation |   |
  |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
V | S | E | I | K | T | L | V | T | F | F | G | G | T | G | D | L | A | K | R | K | L | Y | P | S | V | F | N | L | Y | K | K | G | Y | L | Q | K | H | F | A | I | V | G | T | A | R | Q | A | L | N | D | D | E | F | K | Q | L | V | R | D | S | I | K | D | F | T | D | D | Q | A | Q | A | E | A | F | I | E | H | F | S |
Template Known Secondary structure |   |
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|  |  |  |  |  |  | T | T | T | S |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
| S | S |  |  |  |  |  |  |  | S | S |
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|  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| S |
|  |  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
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  |   |
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50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
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. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
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. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
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|  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  |
Query SS confidence |   |
. |
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Query Sequence |   |
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R | I | P | Y | A | D | S | L | S | S | L | A | A | S | C | D | . |
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A | V | F | V | H | S | S | T | A | S | H | F | D | V | V | S | T | L | L | N | A | G | V | . |
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H | V | C | V | D | K | P | L | A | E | N | L | R | D | A | E | R | L |
Query Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
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| . | . | . | . | . | . | . |   |
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Alig confidence |   |
. | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |
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|   |   |   |   |   |   |   |
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|   |
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|   |
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Template Sequence |   |
Y | R | A | H | D | V | T | D | A | A | S | Y | A | V | L | K | E | A | I | E | E | A | A | D | K | F | D | I | D | G | N | R | I | F | Y | M | S | V | A | P | R | F | F | G | T | I | A | K | Y | L | K | S | E | G | L | L | A | D | T | G | Y | N | R | L | M | I | E | K | P | F | G | T | S | Y | D | T | A | A | E | L |
Template Known Secondary structure |   |
 |  |  |
|
| T | T |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |
|  |  |  |  |  |
| S |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
| S | S | S |
|  |  |  |  |  |
| S |
| S |
| S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
  |
  |   |
107 | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
Query SS confidence |   |
|
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Query Sequence |   |
V | E | L | A | A | R | K |
Query Conservation |   |
  |   |   |
|   |   |   |
Alig confidence |   |
|
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|
|
Template Conservation |   |
|   |   |
|   |   |   |
Template Sequence |   |
Q | N | D | L | E | N | A |
Template Known Secondary structure |   |
 |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
161 | . | . | . | . | . | . |
  |