Job Description P75931 Confidence 93.41% Date Thu Jan 5 12:16:06 GMT 2012 Rank 493 Aligned Residues 109 % Identity 14% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.														50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure											.																					.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																					.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	L	R	I	G	V	V	G	.	L	G	G	I	A	Q	K	A	W	L	P	V	L	A	A	A	S	D	W	T	.	.	.	.	.	L	Q	G	A	W	S	P	T	R	A	K	A	L	P	I	C	E	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	P	Y	A	D	S	L	S	S	L	A	A
Query Conservation											.																					.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.								.													.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		T	P	M	R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	.	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T	A	F	K
Template Known Secondary structure										S	T	T	S						.							T	T	T	T	T		T	T											S																	T	T	T		T	T								S						T	T
Template Predicted Secondary structure																			.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		S	C	D	A	V	F	V	H	S	S	T	A	S	H	F	D	V	V	S	T	L	L	N	A	G	V	H	V	C	V	D	K	P	L	A	E	N	L	R	D	A	E	R	L	V	E	L	A	A	R	K	.	.	.	K	L	T	L	M	V	G	F	N
Query Conservation																																																					.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	D	V	A	L	L	V	G	A	R	P	R	G	P	G	M	E	R	K	D	L	L	E	A	.	.	.	.	.	.	.	.	.	.	.	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N
Template Known Secondary structure		T		S												T	T										.	.	.	.	.	.	.	.	.	.	.																S		T	T							S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.												.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions