Job Description P60757 Confidence 96.73% Date Thu Jan 5 12:07:08 GMT 2012 Rank 20 Aligned Residues 192 % Identity 15% Template d2nxoa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.04

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	L	R	I	A	M	Q	K	S	G	R	L	S	D	D	S	R	E	L	L	A	R	C	G	I	K	I	N	L	H	T	Q	R	L	I	A	M	A	E	N	M	P	I	D	I	L	R	V	R	D	D	D	I	P	G	L	V	M	D	G	V	V	D	L	G	I	I	G	E	N	V	L	E	E	E	L	L	N	R
Query Conservation
Alig confidence										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template Sequence		T	R	P	R	V	G	H	I	.	Q	F	L	N	C	L	P	L	Y	W	G	L	A	R	T	G	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	F	E	L	T	K	D	T	P	E	K	L	S	E	Q	L	V	R	G	D	L	D	I	G	P	V	T	L	V	E	F	L	K	N	A	D	D	.
Template Known Secondary structure										.		S	G	G	G										T	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G																	T	T	S		S												T	G	G	G	.
Template Predicted Secondary structure										.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Template SS confidence
		5	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30															.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		R	A	Q	G	E	D	P	R	Y	F	T	L	R	R	L	D	F	G	G	C	R	L	S	L	A	T	P	V	D	E	A	W	D	G	P	L	S	L	N	G	K	R	I	A	.	.	.	.	T	S	Y	P	H	L	L	K	R	Y	L	D	Q	K	G	I	S	F	K	S	C	L	L	N	G	S	V	E	V	A	P	R
Query Conservation																																														.	.	.	.
Alig confidence		.	.	.	.	.																								.	.	.	.													.	.	.	.
Template Conservation		.	.	.	.	.																								.	.	.	.
Template Sequence		.	.	.	.	.	L	V	A	F	P	D	I	A	V	G	C	D	G	P	V	M	S	C	V	I	V	S	Q	.	.	.	.	V	P	L	D	R	L	D	G	A	R	V	A	L	G	S	T	S	R	T	S	V	R	L	A	Q	L	L	L	S	E	R	F	G	V	Q	P	D	Y	Y	T	C	P	P	D	L	S	L	M
Template Known Secondary structure		.	.	.	.	.												S	S			S	S						S	.	.	.	.	S		T	T	S		S	S	S						T	T		S													T	S													S	S
Template Predicted Secondary structure		.	.	.	.	.																								.	.	.	.
Template SS confidence
							69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.										.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.
Query Sequence		A	G	L	A	D	A	I	C	D	L	V	S	T	G	A	T	L	E	A	N	G	L	R	E	V	E	.	.	.	.	.	.	.	.	.	V	I	Y	R	S	K	A	C	L	I	Q	R	D	G	E	M	E	E	S	K	Q	Q	L	I	D	K	L	L	T	R	I	Q	G	V	I	Q
Query Conservation																												.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																						.
Template Sequence		A	A	V	L	I	G	D	A	A	L	R	A	N	M	I	D	G	P	R	Y	G	L	D	V	H	D	L	G	A	L	W	K	E	W	T	G	L	P	F	V	F	A	V	W	A	A	R	R	D	Y	A	E	.	R	E	P	V	I	T	R	K	V	H	E	A	F	L	A	S	R	N
Template Known Secondary structure																T					T	T															S																	.
Template Predicted Secondary structure																																																						.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions