Job Description P60757 Confidence 27.22% Date Thu Jan 5 12:07:08 GMT 2012 Rank 91 Aligned Residues 78 % Identity 12% Template d2hava1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.70

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		45	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.										.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure													.																																																.	.	.	.	.	.	.	.	.
Query SS confidence													.																																																.	.	.	.	.	.	.	.	.
Query Sequence		N	M	P	I	D	I	L	R	V	R	D	.	D	D	I	P	G	L	V	M	D	G	V	V	D	L	G	I	I	G	E	N	V	L	E	E	E	L	L	N	R	R	A	Q	G	E	D	P	R	Y	F	T	L	R	R	L	D	F	G	.	.	.	.	.	.	.	.	.	G	C	R	L	S	L	A	T	P	V	D	E
Query Conservation													.																																																.	.	.	.	.	.	.	.	.
Alig confidence													.																													.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		V	G	K	I	E	C	V	S	A	E	T	T	E	D	C	I	A	K	I	M	N	G	E	A	D	A	M	S	L	D	G	G	F	V	Y	I	A	G	K	C	.	.	.	.	.	.	G	L	V	P	V	L	A	E	N	Y	N	K	S	D	N	C	E	D	T	P	E	A	G	Y	F	A	V	A	V	V	K	K	S	A
Template Known Secondary structure		T	T	S							S	S											T	S																	T	.	.	.	.	.	.	T										S	S	T	T	S	G	G	G														T	T	S
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.							.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	D	G	P	L	S	L	N	G	K	R	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	L	T	W	D	N	L	K	G	K	K	S	C
Template Known Secondary structure		S	S			G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions