Job Description P60757 Confidence 95.14% Date Thu Jan 5 12:07:08 GMT 2012 Rank 27 Aligned Residues 185 % Identity 16% Template d1zbma1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		E	N	M	P	I	D	I	L	R	V	R	D	D	D	I	P	G	L	V	M	D	G	V	V	D	L	G	I	I	G	E	N	V	L	E	E	E	L	L	N	R	R	A	Q	G	E	D	P	R	Y	F	T	L	R	R	L	D	F	G	G	C	R	L	S	L	A	T	P	V	D	E	A	W	.	.	.	D	G	P	L
Query Conservation																																																																											.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.								.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		T	W	L	E	I	E	H	V	I	E	D	I	E	T	L	N	R	K	A	F	N	A	E	Y	E	V	T	A	I	S	A	H	A	Y	A	L	L	D	D	K	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	I	L	S	A	G	A	S	V	.	.	.	.	G	D	G	Y	G	P	V	V	V	A	K	S	E	I
Template Known Secondary structure			S																	G	G	G	T			S										T	T	S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.					S	S					.	.	.	.		S	S								S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.													.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.										.	.	.
Predicted Secondary structure																										.											.																																	.	.	.	.	.	.	.	.	.
Query SS confidence																										.											.																																	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	N	G	K	R	I	A	T	S	Y	P	H	L	L	K	R	Y	L	D	Q	K	G	I	.	S	F	K	S	C	L	L	N	G	S	.	V	E	V	A	P	R	A	G	L	A	D	A	I	C	D	L	V	S	T	G	A	T	L	E	A	N	G	L	R	E	V	E	.	.	.	.	.	.	.	.	.	V	I	Y
Query Conservation																										.											.																																	.	.	.	.	.	.	.	.	.
Alig confidence																										.											.																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	D	G	K	R	I	A	V	P	G	R	Y	T	T	A	N	L	L	L	K	L	A	V	E	D	F	E	P	V	E	X	P	F	D	R	I	I	Q	A	V	L	D	E	E	V	D	A	G	L	L	I	H	E	G	Q	I	T	Y	A	D	Y	G	L	K	C	V	L	D	L	W	D	W	W	S	E	Q	V	K	L
Template Known Secondary structure				T	T						S		T	T	S											S	S								G	G	G							T	T	S	S	S						S	G	G	G	G	T	G	G	G	G	T													T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	K	A	C	L	I	Q	R	D	G	E	M	E	E	S	K	Q	Q	L	I	D	K	L	L	T	R	I	Q	G	V	I	Q	A	R	E	S	K	Y	I	M	M	H	A	P	T	E	R	L	D	E	V	I	A	L	L	P	G	A	E	R	P	T	I
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.
Template Sequence		P	L	P	L	G	L	N	A	I	R	R	D	L	S	V	E	V	Q	E	E	F	L	R	A	X	R	E	S	I	A	F	A	I	E	N	.	.	.	.	.	.	.	.	.	P	D	E	A	I	E	Y	A	X	K	Y	S	R	G	L	D	R	E	R	A
Template Known Secondary structure												T	T	S																						S	.	.	.	.	.	.	.	.	.									G	G	G		T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions