Job Description P60757 Confidence 96.19% Date Thu Jan 5 12:07:08 GMT 2012 Rank 24 Aligned Residues 220 % Identity 12% Template d1p99a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		6	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		R	L	R	I	A	M	Q	.	K	S	G	R	L	S	D	D	S	R	E	L	L	A	R	C	G	I	K	I	N	L	H	T	Q	R	L	I	A	M	A	E	N	M	P	I	D	I	L	R	V	R	D	D	D	I	P	G	L	V	M	D	G	V	V	D	L	G	I	I	G	E	N	V	L	E	E	E	L	L	N	R
Query Conservation									.
Alig confidence									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Sequence		K	V	T	I	G	V	A	S	N	D	T	K	A	W	E	K	V	K	E	L	A	K	K	D	D	I	D	V	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	H	F	S	D	Y	N	L	P	N	K	A	L	N	D	G	D	I	D	M	N	A	F	Q	H	F	A	F	L	D	.	.	.	.	Q
Template Known Secondary structure								S	S	S													G	G	G	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	T	T	S							T	T	S	S	S												.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																														.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	Q	G	E	D	P	R	Y	F	T	L	R	R	L	D	F	G	G	C	R	L	S	L	A	T	P	V	D	E	A	W	D	G	P	L	S	L	N	G	K	R	I	A	.	.	.	.	T	S	Y	P	H	L	L	K	R	Y	L	D	Q	K	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.													.	.										.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.													.	.
Template Sequence		Y	K	K	A	H	K	G	T	K	I	S	A	L	S	T	T	V	L	A	P	.	L	G	I	Y	S	D	K	I	K	D	V	K	.	.	K	V	K	D	G	A	K	V	V	I	P	N	D	V	S	N	Q	A	R	A	L	K	L	L	E	A	A	G	L	I	K	L	K	K	D	F	G	L	A	G	T	V	K	D	I
Template Known Secondary structure							T	T														.						S	S		S		G	G	.	.	G			T	T								S														T	T	S					T	T			T	T			G	G	G
Template Predicted Secondary structure																						.													.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
							145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.									.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	S	F	K	S	C	L	L	N	G	S	V	E	V	A	P	R	A	G	L	A	D	A	I	C	D	L	V	S	T	G	A	T	L	E	A	N	G	L	R	E	V	E	V	I	Y	R	S	K	.	.	.	.	.	.	.	.	A	C	L	I	Q	R	D	G	E	M	E	E	S	K	Q	Q	L	I	D
Query Conservation		.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.									.																																								.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		T	S	N	P	K	H	L	K	I	T	A	V	D	.	A	Q	Q	T	A	R	A	L	S	D	V	D	I	A	V	I	N	N	G	V	A	T	K	A	G	K	D	P	K	N	D	P	I	F	L	E	K	S	N	S	D	A	V	K	P	Y	I	N	I	V	A	V	N	D	K	D	L	D	N	K	T	Y	A	K	I	V
Template Known Secondary structure					T	T									.	G	G	G	T	T	G	G	G	G	T	S	S												T	T			T	T	T	S		S						S	S	G	G	G	G	G	G								G	G	G	T	T
Template Predicted Secondary structure															.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		212	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		K	L	L	.	.	.	T	R	I	Q	G	V	I	Q	A	R	E	S	K	Y	I	M	M	H	A	P	T	E	R	L	D	E	V	I	A	L	L	P	G	A
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		E	L	Y	H	S	K	E	A	Q	K	A	L	Q	E	D	V	K	D	G	E	K	P	V	N	L	S	K	D	E	I	K	A	I	E	T	S	L	A	G	M
Template Known Secondary structure						S												T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions