Job Description P60757 Confidence 100.00% Date Thu Jan 5 12:07:08 GMT 2012 Rank 8 Aligned Residues 201 % Identity 30% Template d1o63a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.00

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	I	A	M	Q	K	S	G	R	L	S	D	D	S	R	E	L	L	A	R	C	G	I	K	I	N	L	H	T	Q	R	L	I	A	M	A	E	N	M	P	I	D	I	L	R	V	R	D	D	D	I	P	G	L	V	M	D	G	V	V	D	L	G	I	I	G	E	N	V	L	E	E	E	L	L	N	R	R	A
Query Conservation
Alig confidence								.																												.	.	.																																									.	.	.
Template Conservation								.																												.	.	.																																									.	.	.
Template Sequence		L	K	L	A	I	P	.	K	G	R	L	E	E	K	V	X	T	Y	L	K	K	T	G	V	I	F	E	R	E	S	S	I	L	R	.	.	.	E	G	K	D	I	V	C	F	X	V	R	P	F	D	V	P	T	Y	L	V	H	G	V	A	D	I	G	F	C	G	T	D	V	L	L	E	K	E	T	S	.	.	.
Template Known Secondary structure								.		S	T	T												T								S	S			.	.	.			T	T								G	G	G							T	T	S		S												S				.	.	.
Template Predicted Secondary structure								.																												.	.	.																																									.	.	.
Template SS confidence
		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	E	D	P	R	Y	F	T	L	R	R	L	D	F	G	G	C	R	L	S	L	A	T	P	V	D	E	A	W	D	G	P	L	S	L	N	G	K	R	I	A	T	S	Y	P	H	L	L	K	R	Y	L	D	Q	K	G	I	S	F	K	S	C	L	L	N	G	S	V	E	V	A	P	R	A	G	L	A	D	A
Query Conservation
Alig confidence		.	.	.	.	.	.																													.	.	.	.
Template Conservation		.	.	.	.	.	.																													.	.	.	.
Template Sequence		.	.	.	.	.	.	L	I	Q	P	F	F	I	P	T	N	I	S	R	X	V	L	A	G	P	K	G	R	G	I	P	E	G	E	.	.	.	.	K	R	I	A	T	K	F	P	N	V	T	Q	R	Y	C	E	S	K	G	W	H	C	R	I	I	P	L	K	G	S	V	E	L	A	P	I	A	G	L	S	D	L
Template Known Secondary structure		.	.	.	.	.	.		B			S															T	T	T				S	S		.	.	.	.						S													T									S	S		T	T						T	S		S
Template Predicted Secondary structure		.	.	.	.	.	.																													.	.	.	.
Template SS confidence
								75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	D	L	V	S	T	G	A	T	L	E	A	N	G	L	R	E	V	E	V	I	Y	R	S	K	A	C	L	I	Q	R	D	G	E	M	E	E	S	K	Q	Q	L	I	D	K	L	L	T	R	I	Q	G	V	I	Q	A	R	E
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		I	V	D	I	T	E	T	G	R	T	L	K	E	N	N	L	E	I	L	D	E	I	F	V	I	R	T	H	V	V	V	N	P	V	S	Y	R	.	T	K	R	E	E	V	V	S	F	L	E	K	L	Q	E	V	I	E	H	D	S
Template Known Secondary structure							S	S	S						T	T																							.		T
Template Predicted Secondary structure																																							.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions