Job Description P60757 Confidence 100.00% Date Thu Jan 5 12:07:08 GMT 2012 Rank 6 Aligned Residues 202 % Identity 31% Template d1nh8a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	R	I	A	M	Q	K	S	G	R	L	S	D	D	S	R	E	L	L	A	R	C	G	I	K	I	N	L	H	T	Q	R	L	I	A	M	A	E	N	M	P	I	D	I	L	R	V	R	D	D	D	I	P	G	L	V	M	D	G	V	V	D	L	G	I	I	G	E	N	V	L	E	E	E	L	L	N	R	R
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		M	L	R	V	A	V	P	N	K	G	A	L	S	E	P	A	T	E	I	L	A	E	A	G	Y	R	R	R	T	D	S	K	D	L	T	V	I	D	P	V	N	N	V	E	F	F	F	L	R	P	K	D	I	A	I	Y	V	G	S	G	E	L	D	F	G	I	T	G	R	D	L	V	C	D	S	G	A	Q	.	.
Template Known Secondary structure									S	S	S	T	T											T	T						S	T	T		S					T	T	T	T								G	G	G								S	S		S													T			.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	G	E	D	P	R	Y	F	T	L	R	R	L	D	F	G	G	C	R	L	S	L	A	T	P	V	D	E	A	W	D	G	P	L	S	L	N	G	K	R	I	A	T	S	Y	P	H	L	L	K	R	Y	L	D	Q	K	G	I	S	F	K	S	C	L	L	N	G	S	V	E	V	A	P	R	A	G	L	A	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.																									.
Template Conservation		.	.	.	.	.	.	.																									.
Template Sequence		.	.	.	.	.	.	.	V	R	E	R	L	A	L	G	F	G	S	S	S	F	R	Y	A	A	P	A	G	R	N	W	.	T	T	A	D	L	A	G	M	R	I	A	T	A	Y	P	N	L	V	R	K	D	L	A	T	K	G	I	E	A	T	V	I	R	L	D	G	A	V	E	I	S	V	Q	L	G	V	A	D
Template Known Secondary structure		.	.	.	.	.	.	.								S												T	T	S			.		G	G	G	G	T	T						S													T									S	S			T					T	T	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.																									.
Template SS confidence
									79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	C	D	L	V	S	T	G	A	T	L	E	A	N	G	L	R	E	V	E	V	I	Y	R	S	K	A	C	L	I	Q	R	D	G	E	M	E	E	S	K	Q	Q	L	I	D	K	L	L	T	R	I	Q	G	V	I	Q	A	R
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		A	I	A	D	V	V	G	S	G	R	T	L	S	Q	H	D	L	V	A	F	G	E	P	L	C	D	S	E	A	V	L	I	E	R	A	E	A	.	.	.	.	.	.	.	R	D	Q	L	V	A	R	V	Q	G	V	V	F	G	Q
Template Known Secondary structure								S	S	S						T	T																						.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions