Return to main results Retrieve Phyre Job Id

Job DescriptionP60757
Confidence36.01%DateThu Jan 5 12:07:08 GMT 2012
Rank81Aligned Residues72
% Identity13%Templated1h76a1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Transferrin
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80. ........90.........100.........110.........120........
Predicted Secondary structure 






.



























Query SS confidence 

























.














































Query Sequence  DDIPGLVMDGVVDLGIIGENVLEEEL. LNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPLSLNGKRIA
Query Conservation   


 

  
  





 
 
 
  . 
         
    




 


 



          
   


Alig confidence 

























.


































.










Template Conservation    

  
  
 

   
     
 
      
 

  
           
  





 
  . 
 







Template Sequence  LDCIKAIRDKEADAVTLDAGLVFEAGLAPYNLKPVVAEFYGQKDNPQTHYYAVAVVKKGSNF. QWNQLQGKRSC
Template Known Secondary structure  TTS

B
TSTTT
BS
TTS
BSTT


.
GGG
TT
Template Predicted Secondary structure 

























.



Template SS confidence 









































































   45....50.........60.........70.........80.........90.........100...... ...110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions