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Job DescriptionP60757
Confidence95.31%DateThu Jan 5 12:07:08 GMT 2012
Rank26Aligned Residues170
% Identity11%Templatec3n5lA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:binding protein component of abc phosphonate transporter; PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.... .....60.........70.........80.........90.........100.........110.........120.
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Query Sequence  NMPIDILRVR. DDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPLS. .
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Template Sequence  GYQVKAFFAPDYAGIIQGXRFDKVDIAWYGNKAAXEA. . . VDRAHGEIFAQTVAASGAPGYWSLLIANKDSKIDSLEDXL
Template Known Secondary structure  SS

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   5960.........70.........80.........90..... ....100.........110.........120.........130.....
 
   122.......130... ......140... ......150.........160.........170.........180.
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Query Sequence  . . LNGKRIATSYPH. . . . . . LLKRYLDQKG. . . . . . . ISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANG. . . . .
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Template Sequence  ANAKSLTFGNGDPNSTSGYLVPGYYVFAKNNVDPVKAFKRTLNSSHEVNALAVANKQVDVATFNTEGXERLELTQPEKAR
Template Known Secondary structure  TGGG


TT
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   136...140.........150.........160.........170.........180.........190.........200.........210.....
 
   182.......190.........200.........210.......
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Query Sequence  . LREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRI
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Template Sequence  QLKVIWKSPLIPGDPLVWRNNLSDEQKNKLRDFFFKY
Template Known Secondary structure  T

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   216...220.........230.........240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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