Job Description P60757 Confidence 97.99% Date Thu Jan 5 12:07:08 GMT 2012 Rank 13 Aligned Residues 196 % Identity 15% Template c3ix1A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans Resolution 2.40 Å

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		44	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		E	N	M	P	I	D	I	L	R	V	.	R	D	D	D	I	P	G	L	V	M	D	G	V	V	D	L	G	I	I	G	E	N	V	L	E	E	E	L	L	N	R	R	A	Q	G	E	D	P	R	Y	F	T	L	R	R	L	D	F	G	G	C	R	L	S	L	A	T	P	V	D	E	A	W	D	G	P	L	S	L
Query Conservation												.
Alig confidence												.																															.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		E	G	L	D	V	D	I	V	F	P	T	N	P	T	D	P	I	Q	L	T	A	S	G	A	I	P	L	A	L	S	Y	Q	P	D	V	I	L	A	R	S	K	.	.	.	.	.	.	.	D	L	P	V	V	S	V	A	S	V	V	R	S	P	L	N	H	V	M	F	L	A	E	Q	D	F	D	S	P	A	D	L
Template Known Secondary structure		T	T									S	S	T	T									T	S		S															T	.	.	.	.	.	.	.	T												S									G	G	G			S	S	G	G	G	G
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		123	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure												.	.	.	.													.	.	.																																																	.	.	.
Query SS confidence												.	.	.	.													.	.	.																																																	.	.	.
Query Sequence		N	G	K	R	I	A	T	S	Y	P	.	.	.	.	H	L	L	K	R	Y	L	D	Q	K	G	I	.	.	.	S	F	K	S	C	L	L	N	G	S	V	E	V	A	P	R	A	G	L	A	D	A	I	C	D	L	V	S	T	G	A	T	L	E	A	N	G	L	R	E	V	E	V	I	Y	R	S	K	.	.	.
Query Conservation												.	.	.	.													.	.	.																																																	.	.	.
Alig confidence												.	.	.	.													.	.	.																																																	.	.	.
Template Conservation
Template Sequence		V	G	L	T	V	G	Y	P	G	I	P	V	N	E	P	I	L	K	T	M	V	E	A	A	G	G	D	Y	E	Q	V	H	L	M	D	V	G	F	E	L	G	A	S	I	V	S	G	R	A	D	A	V	V	G	T	Y	I	N	H	E	Y	P	V	L	K	H	E	G	H	D	I	S	Y	F	N	P	V	D	Y	G
Template Known Secondary structure		T	T	S						S		T	T												T	T			G	G	G							T	T									S	S	S	S							T	T	T								T	T								G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
								193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	C	L	I	Q	R	D	G	E	M	E	E	S	K	Q	Q	L	I	D	K	L	L	T	R	I	Q	G	V	I	Q	A	R	E	S	K	Y	I	M	M	H	A	P	T	E	R	L	D	E	V	I	A	L	L	P	G	A	E	R	P	T	I
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.												.																				.	.	.	.	.	.
Template Conservation																			.																				.	.	.	.	.	.
Template Sequence		V	P	E	Y	D	E	L	V	L	I	S	N	E	A	Y	V	E	.	E	S	G	E	V	L	A	A	F	W	R	A	A	L	K	G	Y	E	W	.	.	.	.	.	.	M	V	E	N	P	D	E	A	L	N	V	L	L	T	N	Q	D	E	A	N	F	P	L	I
Template Known Secondary structure							S												.																				.	.	.	.	.	.				S											T	S		T	T	T	S
Template Predicted Secondary structure																			.																				.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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