Job Description P60757 Confidence 77.61% Date Thu Jan 5 12:07:08 GMT 2012 Rank 47 Aligned Residues 127 % Identity 17% Template c3gyyC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:periplasmic substrate binding protein; PDBTitle: the ectoine binding protein of the teaabc trap transporter teaa in the2 apo-state Resolution 2.20 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	P	R	Y	F	T	L	R	R	L	D	F	G	G	C	R	L	S	L	A	T	P	V	D	E	A	W	D	G	P	L	S	L	N	G	K	R	I	A	T	S	Y	P	H	L	L	K	R	Y	L	D	Q	K	G	I	S	F	K	S	C	L	L	N	G	S	V	E	V	A	P	R	A	G	L	A	D	A	I	C
Query Conservation
Alig confidence																						.	.	.	.																																							.
Template Conservation																						.	.	.	.																																							.
Template Sequence		A	E	H	G	L	E	L	L	K	M	Y	P	E	G	E	M	V	V	T	A	.	.	.	.	D	E	P	I	T	S	P	E	D	F	D	N	K	K	I	R	T	M	T	N	P	L	L	A	E	T	Y	K	A	F	G	A	T	P	T	P	L	P	.	W	G	E	V	Y	G	G	L	Q	T	G	I	I	D	G	Q	E
Template Known Secondary structure			T	T	T																	.	.	.	.	S	S				S	G	G	G	S	T	T							S											T	T								.											T	S		S
Template Predicted Secondary structure																						.	.	.	.																																							.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		D	L	V	S	T	G	A	T	L	E	A	N	G	L	R	E	V	E	.	.	.	.	.	.	V	I	Y	R	S	K	A	C	L	I	Q	R	D	G	E	M	E	E	S	K	Q	Q	L	I	D	K	L	L	T	R	I	Q	G	V	I	Q	A
Query Conservation																				.	.	.	.	.	.
Alig confidence		.	.	.																.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	N	P	I	F	W	I	E	S	G	G	L	Y	E	V	S	P	N	L	T	F	T	S	H	G	W	F	T	T	A	M	M	A	N	Q	D	F	Y	E	G	L	S	E	E	D	Q	Q	L	V	Q	D	A	A	D	A	A	Y	D	H
Template Known Secondary structure		.	.	.									T	T	G	G	G	S																										S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions