Job Description P60757 Confidence 85.97% Date Thu Jan 5 12:07:08 GMT 2012 Rank 41 Aligned Residues 111 % Identity 9% Template c3gxaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:outer membrane lipoprotein gna1946; PDBTitle: crystal structure of gna1946 Resolution 2.25 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		R	L	R	I	A	M	Q	K	S	G	R	L	S	.	.	.	.	D	D	S	R	E	L	L	A	R	C	G	I	K	I	N	L	H	T	Q	R	L	I	A	M	A	E	N	M	P	I	D	I	L	R	V	R	D	D	D	I	P	G	L	V	M	D	G	V	V	D	L	G	I	I	G	E	N	V	L	E	E	E	L
Query Conservation															.	.	.	.
Alig confidence									.						.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	V	F	G	T	T	.	V	G	D	F	G	D	M	V	K	E	Q	I	Q	P	E	L	E	K	K	G	Y	T	V	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	F	T	D	Y	V	R	P	N	L	A	L	A	E	G	E	L	D	I	N	V	F	Q	H	K	P	Y	L	D	D	F
Template Known Secondary structure									.	T	T									T							T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S	S									T	S		S
Template Predicted Secondary structure									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		L	N	R	R	A	Q	G	E	D	P	R	Y	F	T	L	R	R	L	D	F	G	G	C	R	L	S	L	A	T	P	V	D	E	A	W	D	G	P	L	S	L	N	.	G	K	R	I	A	T	S	Y	P	H	L	L	K	R	Y	L	D	Q
Query Conservation																																												.
Alig confidence				.	.	.	.	.	.																								.	.	.									.
Template Conservation				.	.	.	.	.	.																								.	.	.
Template Sequence		K	K	.	.	.	.	.	.	E	H	N	L	D	I	T	E	V	F	Q	V	P	T	A	P	L	G	L	Y	P	G	K	.	.	.	L	K	S	L	E	E	V	K	D	G	S	T	V	S	A	P	N	D	P	S	N	F	A	R	V	L	V
Template Known Secondary structure				.	.	.	.	.	.			T											B								S	S	.	.	.				G	G	G			T	T								S
Template Predicted Secondary structure				.	.	.	.	.	.																								.	.	.
Template SS confidence
		108	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions