Job Description P60757 Confidence 97.36% Date Thu Jan 5 12:07:08 GMT 2012 Rank 17 Aligned Residues 196 % Identity 19% Template c2x26A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic aliphatic sulphonates-binding protein; PDBTitle: crystal structure of the periplasmic aliphatic sulphonate2 binding protein ssua from escherichia coli Resolution 1.75 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.									.	.
Query SS confidence																		.	.	.									.	.
Query Sequence		N	T	R	L	R	I	A	M	Q	K	S	G	R	L	S	D	.	.	.	D	S	R	E	L	L	A	R	.	.	C	G	I	K	I	N	L	H	T	Q	R	L	I	A	M	A	E	N	M	P	I	D	I	L	R	V	R	D	D	D	I	P	G	L	V	M	D	G	V	V	D	L	G	I	I	G	E	N	V	L	E
Query Conservation																		.	.	.									.	.
Alig confidence											.							.	.	.									.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	A	L	R	I	G	Y	Q	.	K	G	S	I	G	M	V	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I
Template Known Secondary structure			S								.	T	T										T	T							T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S											T	S		S						S
Template Predicted Secondary structure											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.
Predicted Secondary structure																																																								.	.	.	.													.	.	.
Query SS confidence																																																								.	.	.	.													.	.	.
Query Sequence		E	E	L	L	N	R	R	A	Q	G	E	D	P	R	Y	F	T	L	R	R	L	D	F	G	G	C	R	L	S	L	A	T	P	V	D	E	A	W	D	G	P	L	S	L	N	G	K	R	I	A	T	S	Y	P	.	.	.	.	H	L	L	K	R	Y	L	D	Q	K	G	I	.	.	.	S	F	K	S	C	L	L
Query Conservation																																																								.	.	.	.													.	.	.
Alig confidence							.	.	.	.	.	.																																												.	.	.	.													.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		F	A	Q	A	A	.	.	.	.	.	.	G	A	D	L	V	Y	V	G	V	E	P	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y	L
Template Known Secondary structure						T	.	.	.	.	.	.	T													G	G	G							T	T		S			S	G	G	G	G	T	T	S						T	T	S													T	T			G	G	G	S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		152	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure					.																																.	.	.	.
Query SS confidence					.																																.	.	.	.
Query Sequence		N	G	S	.	V	E	V	A	P	R	A	G	L	A	D	A	I	C	D	L	V	S	T	G	A	T	L	E	A	N	G	L	R	E	V	.	.	.	.	E	V	I	Y	R	S	K	A	C	L	I	Q	R	D	G	E	M	E	E	S	K	Q	Q	L	I	D	K	L	L	T	R	I	Q	G	V	I	Q
Query Conservation					.																																.	.	.	.
Alig confidence					.																																.	.	.	.																			.
Template Conservation																																																											.
Template Sequence		T	P	A	D	A	R	A	A	F	Q	Q	G	N	V	D	A	W	A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	.	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A
Template Known Secondary structure												T	T	S	S	S						T	T									S	S							S	T	T	S																.		T
Template Predicted Secondary structure																																																											.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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