Job Description P60757 Confidence 65.61% Date Thu Jan 5 12:07:08 GMT 2012 Rank 59 Aligned Residues 159 % Identity 14% Template c2hxrA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator cynr; PDBTitle: structure of the ligand binding domain of e. coli cynr, a2 transcriptional regulator controlling cyanate metabolism Resolution 2.05 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		E	N	M	P	I	D	I	L	R	V	R	D	D	D	I	P	G	L	V	M	D	G	V	V	D	L	G	I	I	G	E	N	V	L	E	E	E	L	L	N	R	R	A	Q	G	E	D	P	R	Y	F	T	L	R	R	L	D	F	G	G	C	R	L	S	L	A	T	P	V	D	E	.	.	.	.	.	A	W	D	G
Query Conservation																																																																									.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	I	T	L	Q	L	Q	E	X	S	Q	E	K	I	E	D	X	L	C	R	D	E	L	D	V	G	I	A	F	A	P	V	H	S	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	A	I	P	L	L	T	E	S	L	A	L	V	V	A	Q	H	H	P	L	A	V	H	E	Q	V	A
Template Known Secondary structure		T	T	S																		T	T	S		S						S	S				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S	G	G	G	G		S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		119	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190
Predicted Secondary structure												.	.	.	.	.																																																										.	.	.
Query SS confidence												.	.	.	.	.																																																										.	.	.
Query Sequence		P	L	S	L	N	G	K	R	I	A	.	.	.	.	.	T	S	Y	P	H	L	L	K	R	Y	L	D	Q	K	G	I	S	F	K	S	C	L	L	N	G	S	V	E	V	A	P	R	A	G	L	A	D	A	I	C	D	L	V	S	T	G	A	T	L	E	A	N	G	L	R	E	V	.	.	.	E	V	I	Y	R
Query Conservation												.	.	.	.	.																																																										.	.	.
Alig confidence												.	.	.	.	.																																																										.	.	.
Template Conservation
Template Sequence		L	S	R	L	H	D	E	K	L	V	L	L	S	A	E	F	A	T	R	E	Q	I	D	H	Y	C	E	K	A	G	L	H	P	Q	V	V	I	E	A	N	S	I	S	A	V	L	E	L	I	R	R	T	S	L	S	T	L	L	P	A	A	I	A	T	Q	H	D	G	L	K	A	I	S	L	A	P	P	L	L	E
Template Known Secondary structure		G	G	G	G	G	G								T	T	S													T	T										S												S	S		B					T							T	T							S	S		S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		S	K	A	C	L	I	Q	R	D	G	E	M	E	E	S	.	K	Q	Q	L	I	D	K	L	L	T	R	I
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		R	T	A	V	L	L	R	R	K	N	S	W	Q	T	A	A	A	K	A	F	L	H	X	A	L	D	K	C
Template Known Secondary structure										T	T	S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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