Job Description P60757 Confidence 37.69% Date Thu Jan 5 12:07:08 GMT 2012 Rank 78 Aligned Residues 83 % Identity 16% Template c2dvzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of a periplasmic transporter Resolution 2.30 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																			.	.	.	.	.	.	.	.											.	.	.	.	.																							.	.
Query SS confidence																			.	.	.	.	.	.	.	.											.	.	.	.	.																							.	.
Query Sequence		L	S	L	A	T	P	V	D	E	A	W	D	G	P	L	S	L	.	.	.	.	.	.	.	.	N	G	K	R	I	A	T	S	Y	P	.	.	.	.	.	H	L	L	K	R	Y	L	D	Q	K	G	I	S	F	K	S	C	L	L	N	G	S	.	.	V	E	V	A	P	R	A	G	L	A	D	A	I	C	D	L
Query Conservation																			.	.	.	.	.	.	.	.											.	.	.	.	.																							.	.
Alig confidence																			.	.	.	.	.	.	.	.											.	.	.	.	.																							.	.
Template Conservation
Template Sequence		N	V	V	A	V	N	P	K	F	P	A	K	D	F	K	G	F	L	E	E	L	K	K	N	P	G	K	Y	S	Y	G	S	S	G	T	C	G	V	L	H	L	X	G	E	S	F	K	X	A	T	G	T	D	I	V	H	V	P	Y	K	G	S	G	P	A	V	A	D	A	V	G	G	Q	I	E	L	I	F	D	N
Template Known Secondary structure								T	T	S	S		S	S										T	S	T	T	T						S		T	T	S														T									S	S											T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		V	S	T	G	A	T	L	E	A	N	G	.	L	R	E	V	E	V	I
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		L	P	S	S	X	P	Q	I	Q	A	G	K	L	R	A	X	A	I	A
Template Known Secondary structure											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions